Voltage-gated sodium channel gene repertoire of lampreys: gene duplications, tissue-specific expression and discovery of a long-lost gene

Author:

Zakon Harold H.12ORCID,Li Weiming3,Pillai Nisha E.4,Tohari Sumanty4,Shingate Prashant4,Ren Jianfeng5,Venkatesh Byrappa46

Affiliation:

1. Department of Neuroscience, The University of Texas, Austin, TX 78712, USA

2. Department of Integrative Biology, The University of Texas, Austin, TX 78712, USA

3. Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI 48824, USA

4. Comparative and Medical Genomics Lab, Institute of Molecular and Cell Biology, A*STAR, Biopolis, 138673 Singapore

5. Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, College of Fisheries and Life Sciences, Shanghai Ocean University, Shanghai 201306, People's Republic of China

6. Department of Paediatrics, Yong Loo Lin School of Medicine, National University of Singapore, 119228 Singapore

Abstract

Studies of the voltage-gated sodium (Nav) channels of extant gnathostomes have made it possible to deduce that ancestral gnathostomes possessed four voltage-gated sodium channel genes derived from a single ancestral chordate gene following two rounds of genome duplication early in vertebrates. We investigated the Nav gene family in two species of lampreys (the Japanese lamprey Lethenteron japonicum and sea lamprey Petromyzon marinus ) (jawless vertebrates—agnatha) and compared them with those of basal vertebrates to better understand the origin of Nav genes in vertebrates. We noted six Nav genes in both lamprey species, but orthology with gnathostome (jawed vertebrate) channels was inconclusive. Surprisingly, the Nav2 gene, ubiquitously found in invertebrates and believed to have been lost in vertebrates, is present in lampreys, elephant shark ( Callorhinchus milii ) and coelacanth ( Latimeria chalumnae ). Despite repeated duplication of the Nav1 family in vertebrates, Nav2 is only in single copy in those vertebrates in which it is retained, and was independently lost in ray-finned fishes and tetrapods. Of the other five Nav channel genes, most were expressed in brain, one in brain and heart, and one exclusively in skeletal muscle. Invertebrates do not express Nav channel genes in muscle. Thus, early in the vertebrate lineage Nav channels began to diversify and different genes began to express in heart and muscle.

Funder

The University of Texas

Biomedical Research Council of A*STAR

National Institutes of Health

Great Lakes Fisheries Commission

International S&T Cooperation Programs from Shanghai Committee of Science and Technology

Shanghai Ocean University & Michigan State University Joint Research Center

Publisher

The Royal Society

Subject

General Agricultural and Biological Sciences,General Environmental Science,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine

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