The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements

Author:

Uhlirova Hana12,Kılıç Kıvılcım3,Tian Peifang34,Sakadžić Sava5,Gagnon Louis5ORCID,Thunemann Martin1,Desjardins Michèle1,Saisan Payam A.3,Nizar Krystal6,Yaseen Mohammad A.5,Hagler Donald J.1,Vandenberghe Matthieu17,Djurovic Srdjan89,Andreassen Ole A.7,Silva Gabriel A.1011,Masliah Eliezer3,Kleinfeld David121314ORCID,Vinogradov Sergei15,Buxton Richard B.1,Einevoll Gaute T.1617,Boas David A.5,Dale Anders M.13,Devor Anna135

Affiliation:

1. Department of Radiology, UCSD, La Jolla, CA 92093, USA

2. CEITEC–Central European Institute of Technology and Institute of Physical Engineering, Faculty of Mechanical Engineering, Brno University of Technology, Brno, Czech Republic

3. Department of Neurosciences, UCSD, La Jolla, CA 92093, USA

4. Department of Physics, John Carroll University, University Heights, OH 44118, USA

5. Martinos Center for Biomedical Imaging, MGH, Harvard Medical School, Charlestown, MA 02129, USA

6. Neurosciences Graduate Program, UCSD, La Jolla, CA 92093, USA

7. NORMENT, KG Jebsen Centre for Psychosis Research, Division of Mental Health and Addiction, Oslo University Hospital and University of Oslo, 0407 Oslo, Norway

8. Department of Medical Genetics, Oslo University Hospital, 0407 Oslo, Norway

9. NORMENT, KG Jebsen Centre for Psychosis Research, Department of Clinical Science, University of Bergen, 5020 Bergen, Norway

10. Department of Bioengineering, UCSD, La Jolla, CA 92093, USA

11. Department of Opthalmology, UCSD, La Jolla, CA 92093, USA

12. Department of Physics, UCSD, La Jolla, CA 92093, USA

13. Department of Electrical and Computer Engineering, UCSD, La Jolla, CA 92093, USA

14. Section of Neurobiology, UCSD, La Jolla, CA 92093, USA

15. Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA 19104, USA

16. Department of Mathematical Sciences and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway

17. Department of Physics, University of Oslo, 0316 Oslo, Norway

Abstract

The computational properties of the human brain arise from an intricate interplay between billions of neurons connected in complex networks. However, our ability to study these networks in healthy human brain is limited by the necessity to use non-invasive technologies. This is in contrast to animal models where a rich, detailed view of cellular-level brain function with cell-type-specific molecular identity has become available due to recent advances in microscopic optical imaging and genetics. Thus, a central challenge facing neuroscience today is leveraging these mechanistic insights from animal studies to accurately draw physiological inferences from non-invasive signals in humans. On the essential path towards this goal is the development of a detailed ‘bottom-up’ forward model bridging neuronal activity at the level of cell-type-specific populations to non-invasive imaging signals. The general idea is that specific neuronal cell types have identifiable signatures in the way they drive changes in cerebral blood flow, cerebral metabolic rate of O 2 (measurable with quantitative functional Magnetic Resonance Imaging), and electrical currents/potentials (measurable with magneto/electroencephalography). This forward model would then provide the ‘ground truth’ for the development of new tools for tackling the inverse problem—estimation of neuronal activity from multimodal non-invasive imaging data. This article is part of the themed issue ‘Interpreting BOLD: a dialogue between cognitive and cellular neuroscience’.

Funder

UCSD Center for Brain Activity Mapping

the Research Council of Norway

Natural Sciences and Engineering Research Council of Canada

National Institutes of Health

TUBITAK

the German Research Council

the Ministry of Education, Youth and Sports of the Czech Republic

International Headache Society

Publisher

The Royal Society

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology

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