Non-intersecting leaf insertion algorithm for tree structure models

Author:

Åkerblom Markku1ORCID,Raumonen Pasi1ORCID,Casella Eric2ORCID,Disney Mathias I.34ORCID,Danson F. Mark5ORCID,Gaulton Rachel6ORCID,Schofield Lucy A.7,Kaasalainen Mikko1

Affiliation:

1. Laboratory of Mathematics, Tampere University of Technology, PO Box 553, 33101 Tampere, Finland

2. Centre for Sustainable Forestry and Climate Change, Forest Research, Farnham GU10 4LH, UK

3. Department of Geography, University College London, Gower Street, London WC1E 6BT, UK

4. NERC National Centre for Earth Observation (NCEO), UK

5. School of Environment and Life Sciences, University of Salford, Salford M5 4WT, UK

6. School of Engineering, Newcastle University, Newcastle upon Tyne NE1 7RU, UK

7. School of Humanities, Religion and Philosophy, York St John University, York YO31 7EX, UK

Abstract

We present an algorithm and an implementation to insert broadleaves or needleleaves into a quantitative structure model according to an arbitrary distribution, and a data structure to store the required information efficiently. A structure model contains the geometry and branching structure of a tree. The purpose of this work is to offer a tool for making more realistic simulations of tree models with leaves, particularly for tree models developed from terrestrial laser scanning (TLS) measurements. We demonstrate leaf insertion using cylinder-based structure models, but the associated software implementation is written in a way that enables the easy use of other types of structure models. Distributions controlling leaf location, size and angles as well as the shape of individual leaves are user definable, allowing any type of distribution. The leaf generation process consist of two stages, the first of which generates individual leaf geometry following the input distributions, while in the other stage intersections are prevented by carrying out transformations when required. Initial testing was carried out on English oak trees to demonstrate the approach and to assess the required computational resources. Depending on the size and complexity of the tree, leaf generation takes between 6 and 18 min. Various leaf area density distributions were defined, and the resulting leaf covers were compared with manual leaf harvesting measurements. The results are not conclusive, but they show great potential for the method. In the future, if our method is demonstrated to work well for TLS data from multiple tree types, the approach is likely to be very useful for three-dimensional structure and radiative transfer simulation applications, including remote sensing, ecology and forestry, among others.

Funder

Suomen Akatemia

Forestry Commission GB

Publisher

The Royal Society

Subject

Biomedical Engineering,Biomaterials,Biochemistry,Bioengineering,Biophysics,Biotechnology

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