Individualized survival predictions using state space model with longitudinal and survival data

Author:

Cauchi Mark1ORCID,Mills Andrew R.1,Lawrie Allan2,Kiely David G.3,Kadirkamanathan Visakan1

Affiliation:

1. Department of Automatic Control and Systems Engineering, The University of Sheffield, Mappin Street, Sheffield S1 3JD, UK

2. National Heart and Lung Institute, Imperial College London, Dovehouse Street, London SW3 6LY, UK

3. Sheffield Pulmonary Vascular Disease Unit, Royal Hallamshire Hospital Sheffield, NIHR Biomedical Research Centre Sheffield and Department of Clinical Medicine, The University of Sheffield, Beech Hill Road, Sheffield S10 2RX, UK

Abstract

Monitoring disease progression often involves tracking biomarker measurements over time. Joint models (JMs) for longitudinal and survival data provide a framework to explore the relationship between time-varying biomarkers and patients’ event outcomes, offering the potential for personalized survival predictions. In this article, we introduce the linear state space dynamic survival model for handling longitudinal and survival data. This model enhances the traditional linear Gaussian state space model by including survival data. It differs from the conventional JMs by offering an alternative interpretation via differential or difference equations, eliminating the need for creating a design matrix. To showcase the model’s effectiveness, we conduct a simulation case study, emphasizing its performance under conditions of limited observed measurements. We also apply the proposed model to a dataset of pulmonary arterial hypertension patients, demonstrating its potential for enhanced survival predictions when compared with conventional risk scores.

Funder

University of Sheffield

Publisher

The Royal Society

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