Active sinking particles: sessile suspension feeders significantly alter the flow and transport to sinking aggregates

Author:

Krishnamurthy Deepak12ORCID,Pepper Rachel3ORCID,Prakash Manu2ORCID

Affiliation:

1. Department of Bioengineering, University of California, Berkeley, USA

2. Department of Bioengineering, Stanford University, Stanford, CA, USA

3. Department of Physics, University of Puget Sound, Tacoma, WA, USA

Abstract

Sinking or sedimentation of biological aggregates plays a critical role in carbon sequestration in the ocean and in vertical material fluxes in wastewater treatment plants. In both these contexts, the sinking aggregates are ‘active’, since they are biological hot-spots and are densely colonized by microorganisms including bacteria and sessile protists, some of which generate feeding currents. However, the effect of these feeding currents on the sinking rates, trajectories and mass transfer to these ‘active sinking particles’ has not previously been studied. Here, we use a novel scale-free vertical tracking microscope (a.k.a. gravity machine; Krishnamurthy et al. 2020 Nat. Methods 17 , 1040–1051 ( doi:10.1038/s41592-020-0924-7 )) to follow model sinking aggregates (agar spheres) with attached protists ( Vorticella convallaria ), sinking over long distances while simultaneously measuring local flows. We find that activity due to attached V. convallaria causes significant changes to the flow around aggregates in a dynamic manner and reshapes mass transport boundary layers. Further, we find that activity-mediated local flows along with sinking modify the encounter and plume cross-sections of the aggregate and induce sustained aggregate rotations. Overall, our work shows the important role of biological activity in shaping the near-field flows around aggregates with potentially important effects on aggregate fate and material fluxes.

Funder

Howard Hughes Medical Institute

Schmidt Foundation

Division of Ocean Sciences

Gordon and Betty Moore Foundation

Division of Biological Infrastructure

Division of Integrative Organismal Systems

CZ Biohub

Publisher

The Royal Society

Subject

Biomedical Engineering,Biochemistry,Biomaterials,Bioengineering,Biophysics,Biotechnology

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