The dark side of the moon: first insights into the microbiome structure and function of one of the last glacier-fed streams in Africa

Author:

Michoud Grégoire1ORCID,Kohler Tyler J.1ORCID,Ezzat Leïla1ORCID,Peter Hannes1ORCID,Nattabi Juliet Kigongo2ORCID,Nalwanga Rosemary2,Pramateftaki Paraskevi1ORCID,Styllas Michail1ORCID,Tolosano Matteo1ORCID,De Staercke Vincent1ORCID,Schön Martina1ORCID,Marasco Ramona3ORCID,Daffonchio Daniele3ORCID,Bourquin Massimo1ORCID,Busi Susheel Bhanu4ORCID,Battin Tom J.1ORCID

Affiliation:

1. River Ecosystems Laboratory, Alpine and Polar Environmental Research Center, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland

2. Department of Zoology, Entomology and Fisheries Sciences (ZEFs), College of Natural Sciences, Makerere University, Kampala, Uganda

3. Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia

4. Systems Ecology Group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg

Abstract

The glaciers on Africa's ‘Mountains of the Moon' (Rwenzori National Park, Uganda) are predicted to disappear within the next decades owing to climate change. Consequently, the glacier-fed streams (GFSs) that drain them will vanish, along with their resident microbial communities. Despite the relevance of microbial communities for performing ecosystem processes in equatorial GFSs, their ecology remains understudied. Here, we show that the benthic microbiome from the Mt. Stanley GFS is distinct at several levels from other GFSs. Specifically, several novel taxa were present, and usually common groups such as Chrysophytes and Polaromonas exhibited lower relative abundances compared to higher-latitude GFSs, while cyanobacteria and diatoms were more abundant. The rich primary producer community in this GFS likely results from the greater environmental stability of the Afrotropics, and accordingly, heterotrophic processes dominated in the bacterial community. Metagenomics revealed that almost all prokaryotes in the Mt. Stanley GFS are capable of organic carbon oxidation, while greater than 80% have the potential for fermentation and acetate oxidation. Our findings suggest a close coupling between photoautotrophs and other microbes in this GFS, and provide a glimpse into the future for high-latitude GFSs globally where primary production is projected to increase with ongoing glacier shrinkage.

Funder

The NOMIS Foundation

Charles University

Charles University Research Centre

King Abdullah University of Science and Technology

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Publisher

The Royal Society

Subject

Multidisciplinary

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