Transcriptome Analysis on the ALAN-Induced Zebrafish Ovary: Desynchronization of Life Processes and Initiation of Diseases

Author:

Labala Rajendra KumarORCID,Khan Zeeshan AhmadORCID,Mondal GopinathORCID,Hazra SubhajitORCID,Banerjee BidishaORCID,Chattoraj AsamanjaORCID

Abstract

Objective: The effect of artificial light at night (ALAN) on “transcriptome” is prominent owing to its capacity for “desynchronization” of organismal physiology. Light influences the circadian rhythm. This study aims to explore the ALAN-induced ovarian transcriptome of zebrafish for desynchronization of life processes. Methods: Four experimental conditions were set up for female zebrafish: one normal 12-hour light and 12-hour dark (LD) cycle, and three continuous exposures to ALAN for one week (LLW), one month (LLM), and one year (LLY). The whole transcriptome data analysis of the ALAN-exposed samples was then compared with the normal sample using RNA-Seq, followed by exploratory analyses. Results: The analysis revealed two different patterns of expression of genes where LLW and LLM differ with LLY samples in comparison to LD. Compared to LD, downregulation of the predicted hub genes was observed in all treatments; ribosome and oxidative phosphorylation pathways were enriched. LLY vs. LD contrast depicts the enrichment of three more pathways—RNA polymerase, adhesion junction, and signaling. The gene ontology (GO) enrichment portrays more prevalent biological processes in LLW vs. LD and LLM vs. LD than in LLY vs. LD. Contrast-wise disease annotation represents neoplasms as the most prevalent; disease enrichment denotes the major class of neoplasm, carcinoma, coupled with intellectual disability, global developmental delay, and seizures. Conclusion: Our study displayed desynchronization of various genes and pathways leading to the initiation of diseases, for the first time in zebrafish. Even though, this data shows that ALAN is a serious threat, further research is needed to determine the intensity and the duration of ALAN which might cause potential repercussions.

Publisher

Chronobiology in Medicine

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3