Differential circular RNA expression profiling during osteogenic differentiation in human adipose-derived stem cells

Author:

Kang Yue1,Guo Shu1,Sun Qiang1,Zhang Tao2,Liu Jie3,He Dan2

Affiliation:

1. Department of Plastic Surgery, The First Affiliated Hospital of China Medical University, Shenyang, Liaoning 110001, PR China

2. Department of Stem Cells & Regenerative Medicine, Key Laboratory of Cell Biology, Ministry of Public Health of China, China Medical University, Shenyang, Liaoning 110013, PR China

3. Science Experiment Center, China Medical University, Shenyang, Liaoning 110122, PR China

Abstract

Aim: Circular RNAs (circRNAs) are essential for stem cell differentiation. This study aimed to investigate their exact mechanism of action in human adipose-derived stem cell (hADSC) osteogenesis. Materials & methods: Isolated hADSCs were cultured in growth medium or osteogenic medium, then total RNA was extracted for circRNA microarray, hierarchical cluster, gene ontology, regulating pathway and circRNA–miRNA–mRNA network analyses. Results: A total of 171 circRNAs were upregulated and 119 were downregulated in induced groups compared with those in noninduced groups. Eight circRNAs, 40 miRNAs and 342 mRNAs were selected to construct a competing circRNA-miRNA-mRNA network. Conclusion: These findings may provide novel insight into altered and specific circRNAs that might function as competing endogenous RNAs in hADSCs during osteogenic differentiation.

Publisher

Future Medicine Ltd

Subject

Cancer Research,Genetics

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