Novel DNA methylation biomarkers for hexavalent chromium exposure: an epigenome-wide analysis

Author:

Feng Lingfang1,Guo Xinnian1,Li Tao1,Yao Chunji2,Xia Hailing1,Jiang Zhaoqiang1,Jia Junlin3,Fang Yuan1,Shi Li1,Lu Chensheng Alex4,Lou Jianlin1

Affiliation:

1. Institute of Occupational Diseases, Zhejiang Academy of Medical Sciences, Hangzhou 310013, PR China

2. Institute of Hygiene, Zhejiang Academy of Medical Sciences, Hangzhou 310013, PR China

3. Center for Biostatistics, Bioinformatics & Big Data, The Second Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou 310009, PR China

4. Department of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA

Abstract

Aim: We aimed to identify differential methylation of genes that could illuminate the biological mechanisms of chromium (VI) toxicity in this exposure-control study. Materials & methods: DNA methylation was measured in blood samples collected from electroplating workers and controls using a combination of Infinium Methylation450K Chip and targeted-bisulfite sequencing. QuantiGene assay was used to detect the mRNA expression of differentially methylated genes. Inductively coupled plasma–mass spectrometry was used to quantify metals in blood and urine samples. The cytosine–phosphate–guanine sites methylation and gene expression were confirmed in a human lymphoblastoid cell line. Results & conclusion: A total of 131 differentially methylated cytosine–phosphate–guanine sites were found between exposures and controls. DNA methylation of SEMA4B may serve as a potential biomarker for chromium (VI) exposure.

Publisher

Future Medicine Ltd

Subject

Cancer Research,Genetics

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