Molecular epidemiology of dengue virus circulating during 2021 outbreak in Pakistan

Author:

Hakim Rabia1,Bibi Shaheen1,Ali Qasim1,Sarfraz Bisma1,Arshad Yasir1,Rehman Zaira1,Salman Muhammad1,Ikram Aamer1,Umair Massab1ORCID

Affiliation:

1. Department of Virology, National Institute of Health, Park Road, Chak Shehzad, Islamabad, Pakistan

Abstract

Aim: The current study aimed to identify prevalent dengue serotypes during a major outbreak in 2021 in Pakistan. Materials & methods: From September-November 2021, 373 serum samples from different provinces were tested by RT-PCR for serotype identification, followed by partial sequence analysis of selected dengue-positive samples. Results: Out of 373 samples, 273 (73%) were positive for dengue virus infection with male predominance (61.9%). Complete predominance of DENV-2 serotype (99%) and a single case of DENV-1 was observed. Sequencing data revealed the presence of a cosmopolitan genotype within the DENV-2 Pakistani isolates. Conclusion: This study highlights the persistent predominance of DENV-2 during the 2021 outbreak, suggesting a need to improve surveillance strategies and vector breeding control programs in Pakistan.

Publisher

Future Medicine Ltd

Subject

Virology

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