A precision medicine approach to stress testing using metabolomics and microribonucleic acids

Author:

Limkakeng Alexander T1ORCID,Rowlette Laura-Leigh2,Hatch Ace3,Nixon Andrew B3,Ilkayeva Olga45,Corcoran David6,Modliszewski Jennifer6,Griffin Shannon Michelle1,Ginsburg Geoffrey S78,Voora Deepak78

Affiliation:

1. Division of Emergency Medicine, Duke University, Durham, NC 27710, USA

2. Sequencing & Genomic Technologies Shared Resource, Duke Center for Genomic & Computational Biology, Duke University, Durham, NC, USA

3. Division of Medical Oncology, Duke University, Durham, NC 27710, USA

4. Duke Molecular Physiology Institute, Duke University, Durham, NC 27710, USA

5. Division of Endocrinology, Metabolism & Nutrition, Duke University School of Medicine, Durham, NC 27710, USA

6. Genomic Analysis & Bioinformatics Shared Resource, Duke Center for Genomic & Computational Biology, Duke University, Durham, NC 27710, USA

7. Center for Applied Genomics & Precision Medicine, Duke University, Durham, NC 27710, USA

8. Division of Cardiology, Duke University, Durham, NC 27710, USA

Abstract

Both transcriptomics and metabolomics hold promise for identifying acute coronary syndrome (ACS) but they have not been used in combination, nor have dynamic changes in levels been assessed as a diagnostic tool. We assessed integrated analysis of peripheral blood miRNA and metabolite analytes to distinguish patients with myocardial ischemia on cardiac stress testing. We isolated and quantified miRNA and metabolites before and after stress testing from seven patients with myocardial ischemia and 1:1 matched controls. The combined miRNA and metabolomic data were analyzed jointly in a supervised, dimension-reducing discriminant analysis. We implemented a baseline model (T0) and a stress-delta model. This novel integrative analysis of the baseline levels of metabolites and miRNA expression showed modest performance for distinguishing cases from controls. The stress-delta model showed worse performance. This pilot study shows potential for an integrated precision medicine approach to cardiac stress testing.

Funder

Pilot Grant from the Emergency Medicine Foundation

Publisher

Future Medicine Ltd

Subject

Pharmacology,Molecular Medicine,General Medicine

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3