A cluster analysis of some shapes of diatom valves

Author:

Lyakh Anton M.1ORCID

Affiliation:

1. Kovalevsky Institute of Marine Biological Research RAS, Sevastopol, Russia

Abstract

The results of the application of a cluster analysis to the shapes of some diatom valves are presented in the paper. The cluster analysis uses numeric descriptors of the shapes. To get such descriptors, the outlines of shapes have been transformed to the sequences of normalized and coordinated coefficients of elliptic Fourier transform. The coefficients have been used to construct shape dendrograms with the help of thee variants of hierarchical cluster analysis. The dendrograms have been truncated at the level of 6, 10 and 20 clusters. From the obtained clusters the stable groups of shapes, that are presented in all variant of clustering, have been separated. For each shape group an average shape have been constructed, which has been considered as a type shape. The type shapes are used as a template for the classification of the other shapes of diatom valves.

Publisher

Farwater LLC

Reference11 articles.

1. Arhip. Biblioteka opublikovannyh izobrazhenij odnokletochnyh vodoroslej [Library of published images of unicellular algae]. 2023. https://3d-microalgae.org/arxip (date: 07.06.2023). (In Russ.)

2. Dhingra R.D., Barnes J.W., Hedman M.M., Radebaugh J. Using elliptical Fourier descriptor analysis (EFDA) to quantify Titan lake morphology. The Astronomical Journal. 2019. V. 158, № 6. P. 1–13. https://doi.org/10.3847/1538-3881/ab4907

3. Ezugwu A.E., Ikotun A.M., Oyelade O.O., Abualigah L., Agushaka J.O., Eke C.I., Akinyelu A.A. A comprehensive survey of clustering algorithms: state-of-the-art machine learning applications, taxonomy, challenges, and future research prospects. Engineering Applications of Artificial Intelligence. 2022. V. 110. 104743. https://doi.org/10.1016/j.engappai.2022.104743

4. Gogorev R.M., Gololobova M.A., Lyah A.M., Dorofeyuk N.I. Osnovnye formy stvorok diatomovyh vodoroslej: terminologiya. II. Formy stvorok, simmetrichnye otnositel'no transapikal'noj osi, i perekhodnye (kombinirovannye) formy [The main forms of diatom valves: terminology. II. Forms of valves, symmetrical with respect to the transapical axis, and transitional (combined) forms]. Novosti sistematiki nizshih rastenij. 2023. T. 57-1. P. 7–26. https://doi.org/10.31111/nsnr/2023.57.1.7 (In Russ.)

5. Gololobova M.A., Gogorev R.M., Lyah A.M., Dorofeyuk N.I. Osnovnye formy stvorok diatomovyh vodoroslej: terminologiya. I. Formy stvorok, simmetrichnye otnositel'no apikal'noj osi, i formy s radial'noj simmetriej [The main forms of diatom valves: terminology. I. Leaf shapes symmetrical with respect to the apical axis and shapes with radial symmetry]. Novosti sistematiki nizshih rastenij. 2022. T. 56-1. P. 29–54. https://doi.org/10.31111/nsnr/2022.56.1.29 (In Russ.)

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3