Identification of hepatitis B virus genotypes in the state of São Paulo

Author:

Santos Ana Paula de Torres1,Levi José Eduardo2,Lemos Marcílio Figueiredo3,Calux Samira Julien3,Oba Isabel Takano3,Moreira Regina Célia3

Affiliation:

1. Adolfo Lutz Institute, Brazil; University of São Paulo, Brazil

2. USP, Brazil

3. Adolfo Lutz Institute, Brazil

Abstract

Objective: the aim of this study was to identify HBV genotypes in serum samples from patients from the state of São Paulo, received by the viral hepatitis laboratory, at the Virology Centre of Instituto Adolfo Lutz, from various municipalities. Methods: a total of 94 serum samples were randomly analyzed. Genotyping was performed using nested PCR for amplification of S and Pol regions from viral genome. Genotypes were identified comparing the sequences obtained with the sequences deposited in GenBank. Results: we were able to determine the genotype of 91 (97%) samples, as follows: genotype A (55.3%), D (32%), F (5.3%), C (3.2%) and G (1%). There are few data on the epidemiology of genotype G. This genotype has been detected in restricted areas around the world. Frequently, the genotype G infection occurs in HIV-positive male patients. In our case, the sample identified as G was also positive for HIV but in a female patient, which is an uncommon finding in the scientific literature. Conclusion: in this work, we identified the most frequent genotypes in São Paulo as well as the genotype G, rare among the genotypes found in our environment.

Publisher

FapUNIFESP (SciELO)

Subject

General Medicine

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