Transferability of heterologous primers in Brycon falcatus

Author:

PENHA Diego dos Santos1,SOUZA Felipe Pinheiro de1,LIMA Ed Christian Suzuki de1,URREA-ROJAS Angela Maria1,PANDOLFI Victor César Freitas1,YAMACHITA Andrei Lincoln1,POVH Jayme Aparecido2ORCID,LEITE Natalia Gonçalves1,PEREIRA Ulisses de Pádua1,LOPERA-BARRERO Nelson Mauricio1ORCID

Affiliation:

1. Universidade Estadual de Londrina (UEL), Brazil

2. Universidade Federal de Mato Grosso do Sul (UFMS), Brazil

Abstract

ABSTRACT The genusBryconcomprises fish species of significant socioeconomic and biological importance in Brazil. Despite that, the genetic knowledge about these species is scarce, especially regardingBrycon falcatus. Thus, the objective of this study was to evaluate the transferability of heterologous microsatellite primers inB. falcatus for the first time. Heterologous primers obtained from B. opalinus, B. hilarii, B. insignis, B. orbignyanus, B. amazonicus, Prochilodus argenteus, Prochilodus lineatus, Piaractus mesopotamicus, and Colossoma macropomum were evaluated. The primers that showed the best amplification patterns were applied to a sample of 22 individuals and the genetic parameters were calculated. Nine primers displayed satisfactory cross-amplification withB. falcatus: BoM5 (Brycon opalinus); Bh8, Bh13 and Bh16 (B. hilarii); Borg59 (B. orbignyanus); Bag22 (B. amazonicus); Par12 and Par80 (P. argenteus), and Cm1A8 (C. macropomum). The genetic parameters (number of alleles, effective alleles, allele richness, and expected and observed heterozygosity) and the polymorphic information content (PIC) confirmed the viability of these primers for population genetics analyses. Our study demonstrates the potential of transferability of microsatellite markers from related species and even different genera to B. falcatus, providing usefull tools for future population genetic studies in this species.

Publisher

FapUNIFESP (SciELO)

Subject

General Agricultural and Biological Sciences

Reference44 articles.

1. Application of microsatellite markers in conservation genetics and fisheries management: recent advances in population structure analysis and conservation strategies;Abdul-Muneer P.M.;Genetics Research International,2014

2. Genetic variation in native and farmed populations of Tambaqui (Colossoma macropomum) in the Brazilian Amazon: regional discrepancies in farming systems;Aguiar J.;Anais da Academia Brasileira de Ciências,2013

3. Molecular characterization and phylogenetic relationships among species of the genus Brycon (Characiformes: Characidae) from four hydrographic basins in Brazil;Antunes R.S.P.;Genetics and Molecular Research,2010

4. Isolamento, caracterização de locus microssatélites e estimativa da variabilidade genética de Brycon amazonicus (Spix & Agassiz, 1829) (Characidae: Bryconinae) em ambiente natural e cativeiro;Araújo G.T.C.,2012

5. The endangered species Brycon orbignyanus: genetic analysis and definition of priority areas for conservation;Ashikaga F.Y.;Environmental Biology of Fishes,2015

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3