Author:
Mottin Luc,Goldman Jean-Philippe,Jäggli Christoph,Achermann Rita,Gobeill Julien,Knafou Julien,Ehrsam Julien,Wicky Alexandre,Gérard Camille L.,Schwenk Tanja,Charrier Mélinda,Tsantoulis Petros,Lovis Christian,Leichtle Alexander,Kiessling Michael K.,Michielin Olivier,Pradervand Sylvain,Foufi Vasiliki,Ruch Patrick
Abstract
ObjectivesThe objective of this study is the exploration of Artificial Intelligence and Natural Language Processing techniques to support the automatic assignment of the four Response Evaluation Criteria in Solid Tumors (RECIST) scales based on radiology reports. We also aim at evaluating how languages and institutional specificities of Swiss teaching hospitals are likely to affect the quality of the classification in French and German languages.MethodsIn our approach, 7 machine learning methods were evaluated to establish a strong baseline. Then, robust models were built, fine-tuned according to the language (French and German), and compared with the expert annotation.ResultsThe best strategies yield average F1-scores of 90% and 86% respectively for the 2-classes (Progressive/Non-progressive) and the 4-classes (Progressive Disease, Stable Disease, Partial Response, Complete Response) RECIST classification tasks.ConclusionsThese results are competitive with the manual labeling as measured by Matthew's correlation coefficient and Cohen's Kappa (79% and 76%). On this basis, we confirm the capacity of specific models to generalize on new unseen data and we assess the impact of using Pre-trained Language Models (PLMs) on the accuracy of the classifiers.
Subject
Health Informatics,Medicine (miscellaneous),Biomedical Engineering,Computer Science Applications
Cited by
1 articles.
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