Analysis of human lung mast cells by single cell RNA sequencing
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Published:2023-03-30
Issue:
Volume:14
Page:
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ISSN:1664-3224
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Container-title:Frontiers in Immunology
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language:
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Short-container-title:Front. Immunol.
Author:
Rönnberg Elin,Ravindran Avinash,Mazzurana Luca,Gong Yitao,Säfholm Jesper,Lorent Julie,Dethlefsen Olga,Orre Ann-Charlotte,Al-Ameri Mamdoh,Adner Mikael,Dahlén Sven-Erik,Dahlin Joakim S.,Mjösberg Jenny,Nilsson Gunnar
Abstract
Mast cells are tissue-resident cells playing major roles in homeostasis and disease conditions. Lung mast cells are particularly important in airway inflammatory diseases such as asthma. Human mast cells are classically divided into the subsets MCT and MCTC, where MCT express the mast cell protease tryptase and MCTC in addition express chymase, carboxypeptidase A3 (CPA3) and cathepsin G. Apart from the disctintion of the MCT and MCTC subsets, little is known about the heterogeniety of human lung mast cells and a deep analysis of their heterogeniety has previously not been performed. We therefore performed single cell RNA sequencing on sorted human lung mast cells using SmartSeq2. The mast cells showed high expression of classical mast cell markers. The expression of several individual genes varied considerably among the cells, however, no subpopulations were detected by unbiased clustering. Variable genes included the protease-encoding transcripts CMA1 (chymase) and CTSG (cathepsin G). Human lung mast cells are predominantly of the MCT subset and consistent with this, the expression of CMA1 was only detectable in a small proportion of the cells, and correlated moderately to CTSG. However, in contrast to established data for the protein, CPA3 mRNA was high in all cells and the correlation of CPA3 to CMA1 was weak.
Funder
Vetenskapsrådet
Hjärt-Lungfonden
Cancerfonden
Ellen, Walter and Lennart Hesselman Foundation for Scientific Research
Tore Nilsons Stiftelse för Medicinsk Forskning
Stiftelsen Lars Hiertas Minne
Konsul Th C Berghs Stiftelse
Stiftelsen Tornspiran
O. E. och Edla Johanssons Vetenskapliga Stiftelse
Svenska Sällskapet för Medicinsk Forskning
Magnus Bergvalls Stiftelse
åke Wiberg Stiftelse
Vårdalstiftelsen
Karolinska Institutet
Stiftelsen för Strategisk Forskning
AstraZeneca
Science for Life Laboratory
Publisher
Frontiers Media SA
Subject
Immunology,Immunology and Allergy
Cited by
2 articles.
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