A Not Obvious Correlation Between the Structure of Green Fluorescent Protein Chromophore Pocket and Hydrogen Bond Dynamics: A Choreography From ab initio Molecular Dynamics-Reference-Cited by-同舟云学术

A Not Obvious Correlation Between the Structure of Green Fluorescent Protein Chromophore Pocket and Hydrogen Bond Dynamics: A Choreography From ab initio Molecular Dynamics

Published:2020-10-27 Issue: Volume:7 Page:
ISSN:2296-889X
Container-title:Frontiers in Molecular Biosciences
language:
Short-container-title:Front. Mol. Biosci.

Author:

Coppola Federico,Perrella Fulvio,Petrone Alessio,Donati Greta,Rega Nadia

Funder

Ministero dell’Istruzione, dell’Università e della Ricerca

Gaussian

Publisher

Frontiers Media SA

Subject

Biochemistry, Genetics and Molecular Biology (miscellaneous),Molecular Biology,Biochemistry

Reference137 articles.

1. Perspective: methods for large-scale density functional calculations on metallic systems;Aarons;J. Chem. Phys.,2016

2. Photoinduced chemistry in fluorescent proteins: curse or blessing?;Acharya;Chem. Rev.,2017

3. “Chapter 12 - new computational strategies for the quantum mechanical study of biological systems in condensed phases,”;Adamo,2001

4. Modeling quantum vibrational excitations in condensed-phase molecular systems;Amadei;Theor. Chem. Acc.,2011

5. Unveiling how an archetypal fluorescent protein operates: theoretical perspective on the ultrafast excited state dynamics of gfp variant s65t/h148d;Armengol;J. Phys. Chem.,2015

Cited by 27 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Ranking Single Fluorescent Protein Based Calcium Biosensor Performance by Molecular Dynamics Simulations;2024-07-30

2. Substituent Effects in the Cationic Green Fluorescent Protein Chromophore: Ultrafast Excited‐State Proton Transfer or Twisting?;ChemPhotoChem;2024-05-17

3. Allosteric modulation of fluorescence revealed by hydrogen bond dynamics in a genetically encoded maltose biosensor;Proteins: Structure, Function, and Bioinformatics;2024-04-04

4. Water-modulated low-wavelength fluorescence emission of PSmOrange;Colloids and Surfaces A: Physicochemical and Engineering Aspects;2024-02

5. Photophysics of a nucleic acid–protein crosslinking model strongly depends on solvation dynamics: an experimental and theoretical study;Physical Chemistry Chemical Physics;2024