Computational Study of PCSK9-EGFA Complex with Effective Polarizable Bond Force Field-Reference-Cited by-同舟云学术

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Computational Study of PCSK9-EGFA Complex with Effective Polarizable Bond Force Field

Published:2018-01-15 Issue: Volume:4 Page:
ISSN:2296-889X
Container-title:Frontiers in Molecular Biosciences
language:
Short-container-title:Front. Mol. Biosci.

Author:

Chen Jian,Duan Lili,Ji Changge,Zhang John Z. H.

Funder

Ministry of Science and Technology

National Natural Science Foundation of China

Natural Science Foundation of Shanghai

Natural Science Foundation of Shandong Province

Shanghai Municipal Education Commission

Publisher

Frontiers Media SA

Subject

Biochemistry, Genetics and Molecular Biology (miscellaneous),Molecular Biology,Biochemistry

Reference35 articles.

1. RATTLE: a “velocity” version of the SHAKE algorithm for molecular dynamics calculations;Andersen;J. Comput. Phys,1983

2. Structural and biochemical characterization of the wild-type PCSK9-EGF(AB) complex and natural hypercholesterolemia mutants;Bottomley;J. Biol. Chem.,2008

3. LDL-receptor structure. Calcium cages, acid baths and recycling receptors;Brown;Nature,1997

4. Polarization effects in molecular mechanical force fields;Cieplak;J. Phys.Condens. Matter,2009

5. PCSK9 and LDL cholesterol: unravelling the target to design the bullet;Costet;Trends Biochem. Sci.,2008

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1. Introducing the effective polarizable bond (EPB) model in DNA simulations;Chemical Physics Letters;2021-12

2. Developing an effective polarizable bond method for small molecules with application to optimized molecular docking;RSC Advances;2020

3. Molecular dynamics insights on the role β‐augmentation of the peptide N‐terminus with binding site β‐hairpin of proprotein convertase subtilisin/kexin 9;Chemical Biology & Drug Design;2019-09-06

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