Automated vertebral bone mineral density measurement with phantomless internal calibration in chest LDCT scans using deep learning

Abstract

Objective: To develop and evaluate a fully automated method based on deep learning and phantomless internal calibration for bone mineral density (BMD) measurement and opportunistic low BMD (osteopenia and osteoporosis) screening using chest low-dose CT (LDCT) scans. Methods A total of 1175 individuals were enrolled in this study, who underwent both chest LDCT and BMD examinations with quantitative computed tomography (QCT), by two different CT scanners (Siemens and GE). Two convolutional neural network (CNN) models were employed for vertebral body segmentation and labeling, respectively. A histogram technique was applied for vertebral BMD calculation using paraspinal muscle and surrounding fat as references. 195 cases (by Siemens scanner) as fitting cohort were used to build the calibration function. 698 cases as validation cohort I (VCI, by Siemens scanner) and 282 cases as validation cohort II (VCII, by GE scanner) were performed to evaluate the performance of the proposed method, with QCT as the standard for analysis. Results The average BMDs from the proposed method were strongly correlated with QCT (in VCI: r = 0.896, in VCII: r = 0.956, p < 0.001). Bland–Altman analysis showed a small mean difference of 1.1 mg/cm3, and large interindividual differences as seen by wide 95% limits of agreement (−29.9 to +32.0 mg/cm3) in VCI. The proposed method measured BMDs were higher than QCT measured BMDs in VCII (mean difference = 15.3 mg/cm3, p < 0.001). Osteoporosis and low BMD were diagnosed by proposed method with AUCs of 0.876 and 0.903 in VCI, 0.731 and 0.794 in VCII, respectively. The AUCs of the proposed method were increased to over 0.920 in both VCI and VCII after adjusting the cut-off. Conclusion: Without manual selection of the region of interest of body tissues, the proposed method based on deep learning and phantomless internal calibration has the potential for preliminary screening of patients with low BMD using chest LDCT scans. However, the agreement between the proposed method and QCT is insufficient to allow them to be used interchangeably in BMD measurement. Advances in knowledge: This study proposed an automated vertebral BMD measurement method based on deep learning and phantomless internal calibration with paraspinal muscle and fat as reference.