Risk Stratification for Herpes Simplex Virus Pneumonia Using Elastic Net Penalized Cox Proportional Hazard Algorithm with Enhanced Explainability

Author:

Wang Yu-Chiang12ORCID,Lin Wan-Ying3,Tseng Yi-Ju45ORCID,Fu Yiwen6ORCID,Li Weijia7ORCID,Huang Yu-Chen8,Wang Hsin-Yao9ORCID

Affiliation:

1. Department of Medicine, Brigham and Women’s Hospital, Boston, MA 02115, USA

2. Department of Medicine, Harvard Medical School, Boston, MA 02115, USA

3. Syu Kang Sport Clinic, Taipei 112053, Taiwan

4. Department of Computer Science, National Yang Ming Chiao Tung University, Hsinchu 30010, Taiwan

5. Computational Health Informatics Program, Boston Children’s Hospital, Boston, MA 02115, USA

6. Department of Medicine, Kaiser Permanente Santa Clara Medical Center, Santa Clara, CA 95051, USA

7. Cardiovascular Institute, AdventHealth Orlando, Orlando, FL 32803, USA

8. Department of Thoracic Medicine, Chang Gung Memorial Hospital, Taipei 333, Taiwan

9. Department of Laboratory Medicine, Linkou Chang Gung Memorial Hospital, Taipei 333, Taiwan

Abstract

Herpes simplex virus (HSV) pneumonia is a serious and often fatal respiratory tract infection that occurs in immunocompromised individuals. The early detection of accurate risk stratification is essential in identifying patients who are at high risk of mortality and may benefit from more aggressive treatment. In this study, we developed and validated a risk stratification model for HSV bronchopneumonia using an elastic net penalized Cox proportional hazard algorithm. We analyzed data from a cohort of 104 critically ill patients with HSV bronchopneumonia identified in Chang Gung Memorial Hospital, Linkou, Taiwan: one of the largest tertiary medical centers in the world. A total of 109 predictors, both clinical and laboratory, were identified in this process to develop a risk stratification model that could accurately predict mortality in patients with HSV bronchopneumonia. This model was able to differentiate the risk of death and predict mortality in patients with HSV bronchopneumonia compared to the APACHE II score in the early stage of ICU admissions. Both hazard ratio coefficient and selection frequency were used as the metrics to enhance the explainability of the informative predictors. Our findings suggest that the elastic net penalized Cox proportional hazard algorithm is a promising tool for risk stratification in patients with HSV bronchopneumonia and could be useful in identifying those at high risk of mortality.

Funder

Chang Gung Memorial Hospital

Ministry of Science and Technology, Taiwan

Publisher

MDPI AG

Subject

General Medicine

Reference29 articles.

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