Physics of Ice Nucleation and Antinucleation: Action of Ice-Binding Proteins

Author:

Melnik Bogdan S.1ORCID,Glukhova Ksenia A.1ORCID,Sokolova (Voronova) Evgeniya A.2,Balalaeva Irina V.2ORCID,Garbuzynskiy Sergiy O.1ORCID,Finkelstein Alexei V.134ORCID

Affiliation:

1. Institute of Protein Research, Russian Academy of Sciences, 142290 Pushchino, Russia

2. Institute of Biology and Biomedicine, Lobachevsky State University of Nizhny Novgorod, 603022 Nizhny Novgorod, Russia

3. Faculty of Biotechnology, Lomonosov Moscow State University, 142290 Pushchino, Russia

4. Faculty of Biology, Lomonosov Moscow State University, 119192 Moscow, Russia

Abstract

Ice-binding proteins are crucial for the adaptation of various organisms to low temperatures. Some of these, called antifreeze proteins, are usually thought to inhibit growth and/or recrystallization of ice crystals. However, prior to these events, ice must somehow appear in the organism, either coming from outside or forming inside it through the nucleation process. Unlike most other works, our paper is focused on ice nucleation and not on the behavior of the already-nucleated ice, its growth, etc. The nucleation kinetics is studied both theoretically and experimentally. In the theoretical section, special attention is paid to surfaces that bind ice stronger than water and thus can be “ice nucleators”, potent or relatively weak; but without them, ice cannot be nucleated in any way in calm water at temperatures above −30 °C. For experimental studies, we used: (i) the ice-binding protein mIBP83, which is a previously constructed mutant of a spruce budworm Choristoneura fumiferana antifreeze protein, and (ii) a hyperactive ice-binding antifreeze protein, RmAFP1, from a longhorn beetle Rhagium mordax. We have shown that RmAFP1 (but not mIBP83) definitely decreased the ice nucleation temperature of water in test tubes (where ice originates at much higher temperatures than in bulk water and thus the process is affected by some ice-nucleating surfaces) and, most importantly, that both of the studied ice-binding proteins significantly decreased the ice nucleation temperature that had been significantly raised in the presence of potent ice nucleators (CuO powder and ice-nucleating bacteria Pseudomonas syringae). Additional experiments on human cells have shown that mIBP83 is concentrated in some cell regions of the cooled cells. Thus, the ice-binding protein interacts not only with ice, but also with other sites that act or potentially may act as ice nucleators. Such ice-preventing interaction may be the crucial biological task of ice-binding proteins.

Funder

Russian Science Foundation

Publisher

MDPI AG

Subject

Molecular Biology,Biochemistry

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