Table 2 Fallacy in Descriptive Epidemiology: Bringing Machine Learning to the Table

Author:

Dharma Christoffer12ORCID,Fu Rui13ORCID,Chaiton Michael124ORCID

Affiliation:

1. Dalla Lana School of Public Health, University of Toronto, Toronton, ON M5T 3M7, Canada

2. Center for Addictions and Mental Health, Toronto, ON M6J 1H4, Canada

3. Department of Otolaryngology—Head and Neck Surgery, Temerty Faculty of Medicine, Sunnybrook Hospital, Toronto, ON M4N 3M5, Canada

4. Ontario Tobacco Research Unit, Toronto, ON M5S 2S1, Canada

Abstract

There is a lack of rigorous methodological development for descriptive epidemiology, where the goal is to describe and identify the most important associations with an outcome given a large set of potential predictors. This has often led to the Table 2 fallacy, where one presents the coefficient estimates for all covariates from a single multivariable regression model, which are often uninterpretable in a descriptive analysis. We argue that machine learning (ML) is a potential solution to this problem. We illustrate the power of ML with an example analysis identifying the most important predictors of alcohol abuse among sexual minority youth. The framework we propose for this analysis is as follows: (1) Identify a few ML methods for the analysis, (2) optimize the parameters using the whole data with a nested cross-validation approach, (3) rank the variables using variable importance scores, (4) present partial dependence plots (PDP) to illustrate the association between the important variables and the outcome, (5) and identify the strength of the interaction terms using the PDPs. We discuss the potential strengths and weaknesses of using ML methods for descriptive analysis and future directions for research. R codes to reproduce these analyses are provided, which we invite other researchers to use.

Funder

Canadian Institutes of Health Research

National Cancer Institute of the National Institutes of Health (NIH) and FDA Center for Tobacco Products

CIHR

Publisher

MDPI AG

Subject

Health, Toxicology and Mutagenesis,Public Health, Environmental and Occupational Health

Reference50 articles.

1. On the Need to Revitalize Descriptive Epidemiology;Fox;Am. J. Epidemiol.,2022

2. International Epidemiological Association (2014). A Dictionary of Epidemiology, Oxford University Press. [6th ed.].

3. The Table 2 Fallacy: Presenting and Interpreting Confounder and Modifier Coefficients;Westreich;Am. J. Epidemiol.,2013

4. A Framework for Descriptive Epidemiology;Lesko;Am. J. Epidemiol.,2022

5. Describing a complex primary health care population to support future decision support initiatives;Kueper;IJPDS,2022

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