Molecular Dynamics Simulation from Symmetry Breaking Changing to Asymmetrical Phospholipid Membranes Due to Variable Capacitors during Resonance with Helical Proteins

Author:

Thi Dang Dung12,Monajjemi Majid13,Mollaamin Fatemeh4ORCID,Dang Chien12

Affiliation:

1. Institute for Nanotechnology (INT) Community 6, Vietnam National University, Linh Trung Ward, Thu Duc District, Ho Chi Minh City 700000, Vietnam

2. Vietnam National University Ho Chi Minh City, Community 6, Linh Trung Ward, Thu Duc District, Ho Chi Minh City 700000, Vietnam

3. Department of Chemical Engineering, Central Tehran Branch, Islamic Azad University, Tehran 1477893855, Iran

4. Department of Biology, Faculty of Science, Kastamonu University, Kastamonu 37100, Turkey

Abstract

Biological symmetry breaking is a mechanism in biosystems that is necessary for human survival, and depends on chemical physics concepts at both microscopic and macroscopic scales. In this work, we present a few mechanisms of the signaling phenomenon that have been studied in various tissues of human origin. We exhibit that anatomical asymmetry in the structure of a membrane can produce a flow of extracellular fluid. Furthermore, we exhibit that membrane asymmetry is a misbalance in the composition of the aqueous phases and interaction forces with the protein trans-membrane. Various biological membranes such as DPPC, DMPC, DLPC, and so on, have considerable electrostatic voltages that extend across the phosphor lipids bilayer. For studying these phenomena, we modeled DPPC, DMPC, and DLPC lipid bilayers with a net charge misbalance across the phospholipids. Because asymmetric membranes create the shifted voltages among the various aqueous tissues, this effect makes the charge misbalances cause a voltage of 1.3 V across the DPPC bilayer and 0.8 V across the DMPC bilayer. This subject exhibits the importance of membrane structures on electrostatic potential gradients. Finally, we exhibited that a quantum effect was created in small parts of the cell’s thickness due to the symmetry breaking of asymmetrical phospholipid bilayers.

Funder

Vietnam National University Ho Chi Minh City

Publisher

MDPI AG

Subject

Physics and Astronomy (miscellaneous),General Mathematics,Chemistry (miscellaneous),Computer Science (miscellaneous)

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