N-Containing α-Mangostin Analogs via Smiles Rearrangement as the Promising Cytotoxic, Antitrypanosomal, and SARS-CoV-2 Main Protease Inhibitory Agents

Author:

Pyae Nan Yadanar Lin123ORCID,Maiuthed Arnatchai45ORCID,Phongsopitanun Wongsakorn6,Ouengwanarat Bongkot3,Sukma Warongrit123,Srimongkolpithak Nitipol7,Pengon Jutharat7,Rattanajak Roonglawan7,Kamchonwongpaisan Sumalee7,Ei Zin Zin6ORCID,Chunhacha Preedakorn6,Wilasluck Patcharin89,Deetanya Peerapon89,Wangkanont Kittikhun89,Hengphasatporn Kowit10ORCID,Shigeta Yasuteru10ORCID,Rungrotmongkol Thanyada1112,Chamni Supakarn123ORCID

Affiliation:

1. Pharmaceutical Sciences and Technology Program, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand

2. Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand

3. Natural Products and Nanoparticles Research Unit (NP2), Chulalongkorn University, Bangkok 10330, Thailand

4. Department of Pharmacology, Faculty of Pharmacy, Mahidol University, Bangkok 10400, Thailand

5. Centre of Biopharmaceutical Science for Healthy Ageing, Faculty of Pharmacy, Mahidol University, Bangkok 10400, Thailand

6. Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand

7. National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Pathum Thani 12120, Thailand

8. Center of Excellence for Molecular Biology and Genomics of Shrimp, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand

9. Center of Excellence for Molecular Crop, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand

10. Center for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Ibaraki, Japan

11. Center of Excellence in Biocatalyst and Sustainable Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand

12. Program in Bioinformatics and Computational Biology, Graduate School, Chulalongkorn University, Bangkok 10330, Thailand

Abstract

New N-containing xanthone analogs of α-mangostin were synthesized via one-pot Smiles rearrangement. Using cesium carbonate in the presence of 2-chloroacetamide and catalytic potassium iodide, α-mangostin (1) was subsequently transformed in three steps to provide ether 2, amide 3, and amine 4 in good yields at an optimum ratio of 1:3:3, respectively. The evaluation of the biological activities of α-mangostin and analogs 2–4 was described. Amine 4 showed promising cytotoxicity against the non-small-cell lung cancer H460 cell line fourfold more potent than that of cisplatin. Both compounds 3 and 4 possessed antitrypanosomal properties against Trypanosoma brucei rhodesiense at a potency threefold stronger than that of α-mangostin. Furthermore, ether 2 gave potent SARS-CoV-2 main protease inhibition by suppressing 3-chymotrypsinlike protease (3CLpro) activity approximately threefold better than that of 1. Fragment molecular orbital method (FMO–RIMP2/PCM) indicated the improved binding interaction of 2 in the 3CLpro active site regarding an additional ether moiety. Thus, the series of N-containing α-mangostin analogs prospectively enhance druglike properties based on isosteric replacement and would be further studied as potential biotically active chemical entries, particularly for anti-lung-cancer, antitrypanosomal, and anti-SARS-CoV-2 main protease applications.

Funder

ASEAN and Non-ASEAN scholarships, Chulalongkorn University

Chulalongkorn University grant to the Natural Products and Nanoparticles Research Unit

National Research Council of Thailand

Thailand Science Research and Innovation Fund

Fundamental Fund 2022, Chulalongkorn University

90th Anniversary of the Chulalongkorn University’s Scholarship

Second Century Fund (C2F), Chulalongkorn University

Science Achievement Scholarship of Thailand

Mahidol University

NSTDA’s Research Chair

high-performance computing infrastructure project

Kakehashi project of Tsukuba Innovation Arena (TIA) collaborative research program, CREST JST, Japan

AMED, Japan

Publisher

MDPI AG

Subject

Chemistry (miscellaneous),Analytical Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Molecular Medicine,Drug Discovery,Pharmaceutical Science

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