Exploring the Mechanism of the Intramolecular Diels–Alder Reaction of (2E,4Z,6Z)-2(allyloxy)cycloocta-2,4,6-trien-1-one Using Bonding Evolution Theory

Author:

Adjieufack Abel Idrice123ORCID,Ongagna Jean Moto4ORCID,Essomba Jean Serge2ORCID,Ewonkem Monique Bassomo4ORCID,Oliva Mónica5ORCID,Safont Vicent Sixte5ORCID,Andrés Juan5ORCID

Affiliation:

1. Laboratory of Theoretical Chemistry (LCT), Namur Institute of Structured Matter (NISM), University of Namur, Rue de Bruxelles, 61, B-5000 Namur, Belgium

2. Physical and Theoretical Chemistry Laboratory, University of Yaoundé 1, Yaoundé P.O. Box 812, Cameroon

3. Computational Chemistry Laboratory, High Teacher Training College, University of Yaoundé 1, Yaoundé P.O. Box 47, Cameroon

4. Department of Chemistry, Faculty of Sciences, University of Douala, Douala P.O. Box 2701, Cameroon

5. Analytical and Physical Chemistry Department, Jaume I University, Avda. Sos Baynat s/n, 12071 Castelló, Spain

Abstract

In the present work, the bond breaking/forming events along the intramolecular Diels–Alder (IMDA) reaction of (2E,4Z,6Z)-2(allyloxy)cycloocta-2,4,6-trien-1-one have been revealed within bonding evolution theory (BET) at the density functional theory level, using the M05-2X functional with the cc-pVTZ basis set. Prior to achieving this task, the energy profiles and stationary points at the potential energy surface (PES) have been characterized. The analysis of the results finds that this rearrangement can proceed along three alternative reaction pathways (a–c). Paths a and b involve two steps, while path c is a one-step process. The first step in path b is kinetically favored, and leads to the formation of an intermediate step, Int-b. Further evolution from Int-b leads mainly to 3-b1. However, 2 is the thermodynamically preferred product and is obtained at high temperatures, in agreement with the experimental observations. Regarding the BET analysis along path b, the breaking/forming process is described by four structural stability domains (SSDs) during the first step, which can be summarized as follows: (1) the breaking of the C–O bond with the transfer of its population to the lone pair (V(O)), (2) the reorganization of the electron density with the creation of two V(C) basins, and (3) the formation of a new C–C single bond via the merger of the two previous V(C) basins. Finally, the conversion of Int-b (via TS2-b1) occurs via the reorganization of the electron density during the first stage (the creation of different pseudoradical centers on the carbon atoms as a result of the depopulation of the C–C double bond involved in the formation of new single bonds), while the last stage corresponds to the non-concerted formation of the two new C–C bonds via the disappearance of the population of the four pseudoradical centers formed in the previous stage. On the other hand, along path a, the first step displays three SSDs, associated with the depopulation of the V(C2,C3) and V(C6,C7) basins, the appearance of the new monosynaptic basins V(C2) and V(C7), and finally the merging of these new monosynaptic basins through the creation of the C2–C7 single bond. The second step is described by a series of five SSDs, that account for the reorganization of the electron density within Int-a via the creation of four pseudoradical centers on the C12, C13, C3 and C6 carbon atoms. The last two SSDs deal with the formation of two C-C bonds via the merging of the monosynaptic basins formed in the previous domains.

Funder

University of Namur

FNRS-FRFC

Generalitat Valenciana

Universitat Jaume I

Publisher

MDPI AG

Subject

Chemistry (miscellaneous),Analytical Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Molecular Medicine,Drug Discovery,Pharmaceutical Science

Reference43 articles.

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4. Smith, M.B. (2020). March’s Advanced Organic Chemistry: Reactions, Mechanisms, and Structure, John Wiley & Sons.

5. The chemistry of 2-hydroxy-2,4,6-cyclooctatrienone (1,7-π-homotropolone);Kitahara;Tetrahedron Lett.,1976

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