Application of CRISPR-Cas System to Mitigate Superbug Infections

Author:

Rabaan Ali A.123ORCID,Al Fares Mona A.4ORCID,Almaghaslah Manar5,Alpakistany Tariq6ORCID,Al Kaabi Nawal A.78ORCID,Alshamrani Saleh A.9,Alshehri Ahmad A.9ORCID,Almazni Ibrahim Abdullah9ORCID,Saif Ahmed10ORCID,Hakami Abdulrahim R.10ORCID,Khamis Faryal11,Alfaresi Mubarak1213,Alsalem Zainab14,Alsoliabi Zainab A.15,Al Amri Kawthar Amur Salim16,Hassoueh Amal K.17,Mohapatra Ranjan K.18ORCID,Arteaga-Livias Kovy1920ORCID,Alissa Mohammed21ORCID

Affiliation:

1. Molecular Diagnostic Laboratory, Johns Hopkins Aramco Healthcare, Dhahran 31311, Saudi Arabia

2. College of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia

3. Department of Public Health and Nutrition, The University of Haripur, Haripur 22610, Pakistan

4. Department of Internal Medicine, King Abdulaziz University Hospital, Jeddah 21589, Saudi Arabia

5. Infectious Disease Division, Department of Internal Medicine, Dammam Medical Complex, Dammam 32245, Saudi Arabia

6. Bacteriology Department, Public Health Laboratory, Taif 26521, Saudi Arabia

7. College of Medicine and Health Science, Khalifa University, Abu Dhabi 127788, United Arab Emirates

8. Sheikh Khalifa Medical City, Abu Dhabi Health Services Company (SEHA), Abu Dhabi 51900, United Arab Emirates

9. Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Najran University, Najran 61441, Saudi Arabia

10. Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha 62223, Saudi Arabia

11. Infection Diseases Unit, Department of Internal Medicine, Royal Hospital, Muscat 1331, Oman

12. Department of Pathology and Laboratory Medicine, Zayed Military Hospital, Abu Dhabi 3740, United Arab Emirates

13. Department of Pathology, College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai 505055, United Arab Emirates

14. Department of Epidemic Diseases Research, Institute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia

15. Pharmacy Department, Qatif Central Hospital, Qatif 32654, Saudi Arabia

16. Infection and Control Department, Armed Forces Hospital, Azaibah 130, Oman

17. Pharmacy Department, King Saud Medical City, Riyadh 7790, Saudi Arabia

18. Department of Chemistry, Government College of Engineering, Keonjhar 758002, India

19. Escuela de Medicina-Filial Ica, Universidad Privada San Juan Bautista, Ica 11000, Peru

20. Escuela de Medicina, Universidad Nacional Hermilio Valdizán, Huanuco 10000, Peru

21. Department of Medical Laboratory Sciences, College of Applied Medical Sciences, Prince Sattam Bin Abdulaziz University, Al-Kharj 11942, Saudi Arabia

Abstract

Multidrug resistance in bacterial strains known as superbugs is estimated to cause fatal infections worldwide. Migration and urbanization have resulted in overcrowding and inadequate sanitation, contributing to a high risk of superbug infections within and between different communities. The CRISPR-Cas system, mainly type II, has been projected as a robust tool to precisely edit drug-resistant bacterial genomes to combat antibiotic-resistant bacterial strains effectively. To entirely opt for its potential, advanced development in the CRISPR-Cas system is needed to reduce toxicity and promote efficacy in gene-editing applications. This might involve base-editing techniques used to produce point mutations. These methods employ designed Cas9 variations, such as the adenine base editor (ABE) and the cytidine base editor (CBE), to directly edit single base pairs without causing DSBs. The CBE and ABE could change a target base pair into a different one (for example, G-C to A-T or C-G to A-T). In this review, we addressed the limitations of the CRISPR/Cas system and explored strategies for circumventing these limitations by applying diverse base-editing techniques. Furthermore, we also discussed recent research showcasing the ability of base editors to eliminate drug-resistant microbes.

Funder

Prince Sattam bin Abdulaziz University

Publisher

MDPI AG

Subject

Virology,Microbiology (medical),Microbiology

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