Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases

Author:

Pei Xiao Meng1,Yeung Martin Ho Yin2ORCID,Wong Alex Ngai Nick2ORCID,Tsang Hin Fung23,Yu Allen Chi Shing4ORCID,Yim Aldrin Kay Yuen4,Wong Sze Chuen Cesar1

Affiliation:

1. Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hong Kong 999077, China

2. Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong 999077, China

3. Department of Clinical Laboratory and Pathology, Hong Kong Adventist Hospital, Hong Kong, China

4. Codex Genetics Limited, Unit 212, 2/F., Building 16W, No. 16 Science Park West Avenue, The Hong Kong Science Park, Hong Kong 852, China

Abstract

The outbreak of COVID-19 has positively impacted the NGS market recently. Targeted sequencing (TS) has become an important routine technique in both clinical and research settings, with advantages including high confidence and accuracy, a reasonable turnaround time, relatively low cost, and fewer data burdens with the level of bioinformatics or computational demand. Since there are no clear consensus guidelines on the wide range of next-generation sequencing (NGS) platforms and techniques, there is a vital need for researchers and clinicians to develop efficient approaches, especially for the molecular diagnosis of diseases in the emergency of the disease and the global pandemic outbreak of COVID-19. In this review, we aim to summarize different methods of TS, demonstrate parameters for TS assay designs, illustrate different TS panels, discuss their limitations, and present the challenges of TS concerning their clinical application for the molecular diagnosis of human diseases.

Funder

Research Grants Council Hong Kong

Hong Kong Innovation and Technology Fund University-Industry Collaborative

Lim Peng Suan Charitable Trust

Publisher

MDPI AG

Subject

General Medicine

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