How SARS-CoV-2 Big Data Are Challenging Viral Taxonomy Rules
Author:
Affiliation:
1. North-Western Tuscany Blood Bank, Pisa University Hospital, 56126 Pisa, Italy
2. National Institute for Infectious Diseases “L. Spallanzani”-IRCCS, 00149 Rome, Italy
Abstract
Publisher
MDPI AG
Subject
Virology,Infectious Diseases
Link
https://www.mdpi.com/1999-4915/15/3/715/pdf
Reference12 articles.
1. O’Toole, A.N., Pybus, O., Abram, M.E., Kelly, E.J., and Rambaut, A. (2021). Pango lineage designation and assignment using SARS-CoV-2 spike gene nucleotide sequences. BMC Genom., 23.
2. (2023, January 21). Cov-Lineages/Pango-Designation. Available online: https://github.com/cov-lineages/pango-designation/commits/master.
3. McBroome, J., de Bernardi Schneider, A., Roemer, C., Wolfinger, M.T., Hinrichs, A.S., O’Toole, A.N., Ruis, C., Turakhia, Y., Rambaut, A., and Corbett-Detig, R. (2023). Automated Agnostic Designation of Pathogen Lineages. bioRxiv.
4. Smith, K., Ye, C., and Turakhia, Y. (2023). Tracking and curating putative SARS-CoV-2 recombinants with RIVET. bioRxiv.
5. WHO (2022, September 14). Tracking SARS-CoV-2 Variants. Available online: https://www.who.int/en/activities/tracking-SARS-CoV-2-variants/.
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