TANK Binding Kinase 1 Promotes BACH1 Degradation through Both Phosphorylation-Dependent and -Independent Mechanisms without Relying on Heme and FBXO22

Author:

Liu Liang12ORCID,Matsumoto Mitsuyo13ORCID,Watanabe-Matsui Miki4,Nakagawa Tadashi56,Nagasawa Yuko5,Pang Jingyao1,Callens Bert K. K.17ORCID,Muto Akihiko1,Ochiai Kyoko1,Takekawa Hirotaka1,Alam Mahabub18ORCID,Nishizawa Hironari1ORCID,Shirouzu Mikako9,Shima Hiroki13ORCID,Nakayama Keiko5,Igarashi Kazuhiko13ORCID

Affiliation:

1. Department of Biochemistry, Tohoku University Graduate School of Medicine, Sendai 980-8576, Japan

2. Neuro-Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA

3. Center for Regulatory Epigenome and Diseases, Tohoku University Graduate School of Medicine, Sendai 980-8576, Japan

4. Department of Neurochemistry, Tohoku University Graduate School of Medicine, Sendai 980-8576, Japan

5. Division of Cell Proliferation, Tohoku University Graduate School of Medicine, Sendai 980-8576, Japan

6. Department of Clinical Pharmacology, Faculty of Pharmaceutical Sciences, Sanyo-Onoda City University, Sanyo-Onoda 756-0884, Japan

7. Faculty of Health, Medicine and Life Sciences, Maastricht University, 6229 GT Maastricht, The Netherlands

8. Department of Animal Science and Nutrition, Chattogram Veterinary and Animal Sciences University, Khulshi, Chattogram 4225, Bangladesh

9. Laboratory for Protein Functional and Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama 305-0074, Japan

Abstract

BTB and CNC homology 1 (BACH1) represses the expression of genes involved in the metabolism of iron, heme and reactive oxygen species. While BACH1 is rapidly degraded when it is bound to heme, it remains unclear how BACH1 degradation is regulated under other conditions. We found that FBXO22, a ubiquitin ligase previously reported to promote BACH1 degradation, polyubiquitinated BACH1 only in the presence of heme in a highly purified reconstitution assay. In parallel to this regulatory mechanism, TANK binding kinase 1 (TBK1), a protein kinase that activates innate immune response and regulates iron metabolism via ferritinophagy, was found to promote BACH1 degradation when overexpressed in 293T cells. While TBK1 phosphorylated BACH1 at multiple serine and threonine residues, BACH1 degradation was observed with not only the wild-type TBK1 but also catalytically impaired TBK1. The BACH1 degradation in response to catalytically impaired TBK1 was not dependent on FBXO22 but involved both autophagy-lysosome and ubiquitin-proteasome pathways judging from its suppression by using inhibitors of lysosome and proteasome. Chemical inhibition of TBK1 in hepatoma Hepa1 cells showed that TBK1 was not required for the heme-induced BACH1 degradation. Its inhibition in Namalwa B lymphoma cells increased endogenous BACH1 protein. These results suggest that TBK1 promotes BACH1 degradation in parallel to the FBXO22- and heme-dependent pathway, placing BACH1 as a downstream effector of TBK1 in iron metabolism or innate immune response.

Funder

Grants-in-Aid for Scientific Research from the Japan Society for the Promotion of Science

Grant-in-Aid for Joint Research by Young Researchers from Tohoku University Graduate School of Medicine

Gonryo Medical Foundation

Takeda Science Foundation

Research Grant in the Natural Sciences from the Mitsubishi Foundation

Ministry of Education, Culture, Sports, Science and Technology, Japan and China Scholarship Council

Publisher

MDPI AG

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