Zinc Finger-Homeodomain Transcriptional Factors (ZHDs) in Cucumber (Cucumis sativus L.): Identification, Evolution, Expression Profiles, and Function under Abiotic Stresses

Author:

Gao Yiming1,Zhu Liyan1,An Menghang1,Wang Yaru2,Li Sen1,Dong Yuming1,Yang Songlin1,Shi Kexin1,Fan Shanshan1,Chen Xiaofeng3,Ren Huazhong12,Liu Xingwang12ORCID

Affiliation:

1. Department of Vegetable Science, College of Horticulture, China Agricultural University, Beijing 100193, China

2. Sanya Institute of China Agricultural University, Sanya 572025, China

3. College of Ocean and Agricultural Engineering, Yantai Institute of China Agricultural University, Yantai 264670, China

Abstract

Cucumber (Cucumis sativus L.) is a globally prevalent and extensively cultivated vegetable whose yield is significantly influenced by various abiotic stresses, including drought, heat, and salinity. Transcription factors, such as zinc finger-homeodomain proteins (ZHDs), a plant-specific subgroup of Homeobox, play a crucial regulatory role in stress resistance. In this study, we identified 13 CsZHDs distributed across all six cucumber chromosomes except chromosome 7. Phylogenetic analysis classified these genes into five clades (ZHDI-IV and MIF) with different gene structures but similar conserved motifs. Collinearity analysis revealed that members of clades ZHD III, IV, and MIF experienced amplification through segmental duplication events. Additionally, a closer evolutionary relationship was observed between the ZHDs in Cucumis sativus (C. sativus) and Arabidopsis thaliana (A. thaliana) compared to Oryza sativa (O. sativa). Quantitative real-time PCR (qRT-PCR) analysis demonstrated the general expression of CsZHD genes across all tissues, with notable expression in leaf and flower buds. Moreover, most of the CsZHDs, particularly CsZHD9-11, exhibited varying responses to drought, heat, and salt stresses. Virus-induced gene silencing (VIGS) experiments highlighted the potential functions of CsZHD9 and CsZHD10, suggesting their positive regulation of stomatal movement and responsiveness to drought stress. In summary, these findings provide a valuable resource for future analysis of potential mechanisms underlying CsZHD genes in response to stresses.

Funder

the National Natural Science Foundation of China

the Project of Yazhouwan Scientific and Technological Administration of Sanya

Publisher

MDPI AG

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