HRM Accuracy and Limitations as a Species Typing Tool for Leishmania Parasites

Author:

Filgueira Camila Patricio Braga1ORCID,Pitta-Pereira Daniela2ORCID,Cantanhêde Lilian Motta134ORCID,Ferreira Gabriel Eduardo Melim3ORCID,Dos Reis Sayonara3,Cupolillo Elisa14ORCID,Moreira Otacilio C.5ORCID,Britto Constança2ORCID,Boité Mariana Côrtes1ORCID

Affiliation:

1. Leishmaniasis Research Laboratory, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro 21040-360, Brazil

2. Laboratório de Biologia Molecular e Doenças Endêmicas, Instituto Oswaldo Cruz, FIOCRUZ, Pavilhão Leônidas Deane, Sala 209, Avenida Brasil 4365, Manguinhos, Rio de Janeiro 21045-900, Brazil

3. Laboratório de EpiGenética, Fiocruz Rondônia, Rua da Beira, 7671, Porto Velho 76812-245, Brazil

4. Instituto Nacional de Ciência e Tecnologia de Epidemiologia da Amazônia Ocidental, INCT EpiAmO, Porto Velho 76812-100, Brazil

5. Laboratory of Molecular Virology and Parasitology, Oswaldo Cruz Institute, Fiocruz, Rio de Janeiro 21040-360, Brazil

Abstract

High Resolution Melting Analysis (HRM) has been pointed out as a suitable alternative method to detect and identify Leishmania species. Herein, we aimed to evaluate the sensitivity, specificity, accuracy, and limitations of a HSP70-HRM protocol both as a diagnostic scheme applied in clinical samples and as a species typing tool for laboratory research and reference services. Our data reveal the pronounced species-typing potential of the HSP70-HRM in DNA from cultured parasites. For clinical samples, however, we advise caution due to parasite load-dependent accuracy. In light of these findings and considering the importance of parasite load determination for clinical and research purposes, we recommend the integration of the presented typing scheme and the previously published Leishmania quantifying approach as combined tools for clinicians, surveillance, and research.

Funder

Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro/FAPERJ

Conselho Nacional de Desenvolvimento Científico e Tecnológico/CNPq

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior

Conselho Nacional de Desenvolvimento Científico e Tecnológico, Research Fellow

Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro, CNE

ColBio2020

Fundação de Amparo ao Desenvolvimento das Ações Científicas e Tecnológicas e à Pesquisa-FAPERO

Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro

Publisher

MDPI AG

Subject

Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Spectroscopy,Molecular Biology,General Medicine,Catalysis

Reference35 articles.

1. Alvar, J., Vélez, I.D., Bern, C., Herrero, M., Desjeux, P., Cano, J., Jannin, J., den Boer, M., and WHO Leishmaniasis Control Team (2012). Leishmaniasis worldwide and global estimates of its incidence. PLoS ONE, 7.

2. Pan American Health Organization (2023, March 03). Manual of Procedures for Leishmaniases Surveillance and Control in the Americas [Internet]. Available online: https://iris.paho.org/handle/10665.2/51838.

3. (2023, September 19). Global Report on Neglected Tropical Diseases 2023: Executive Summary [Internet]. Available online: https://www.who.int/publications-detail-redirect/9789240069015.

4. Cutaneous leishmaniasis;Bailey;Clin. Dermatol.,2007

5. First report of Leishmania (Viannia) lindenbergi causing tegumentary leishmaniasis in the Brazilian western Amazon region;Mattos;Parasite,2019

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