Ensemble Learning for Hormone Binding Protein Prediction: A Promising Approach for Early Diagnosis of Thyroid Hormone Disorders in Serum

Author:

Butt Ahmad Hassan1ORCID,Alkhalifah Tamim2ORCID,Alturise Fahad2ORCID,Khan Yaser Daanial3ORCID

Affiliation:

1. Department of Computer Science, Faculty of Computing & Information Technology, University of the Punjab, Lahore 54000, Pakistan

2. Department of Computer, College of Science and Arts in Ar Rass, Qassim University, Ar Rass 51921, Qassim, Saudi Arabia

3. Department of Computer Science, School of Systems and Technology, University of Management and Technology, Lahore 54770, Pakistan

Abstract

Hormone-binding proteins (HBPs) are specific carrier proteins that bind to a given hormone. A soluble carrier hormone binding protein (HBP), which can interact non-covalently and specifically with growth hormone, modulates or inhibits hormone signaling. HBP is essential for the growth of life, despite still being poorly understood. Several diseases, according to some data, are caused by HBPs that express themselves abnormally. Accurate identification of these molecules is the first step in investigating the roles of HBPs and understanding their biological mechanisms. For a better understanding of cell development and cellular mechanisms, accurate HBP determination from a given protein sequence is essential. Using traditional biochemical experiments, it is difficult to correctly separate HBPs from an increasing number of proteins because of the high experimental costs and lengthy experiment periods. The abundance of protein sequence data that has been gathered in the post-genomic era necessitates a computational method that is automated and enables quick and accurate identification of putative HBPs within a large number of candidate proteins. A brand-new machine-learning-based predictor is suggested as the HBP identification method. To produce the desirable feature set for the method proposed, statistical moment-based features and amino acids were combined, and the random forest was used to train the feature set. During 5-fold cross validation experiments, the suggested method achieved 94.37% accuracy and 0.9438 F1-scores, respectively, demonstrating the importance of the Hahn moment-based features.

Publisher

MDPI AG

Subject

Clinical Biochemistry

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