A Machine Learning System to Indicate Diagnosis of Idiopathic Pulmonary Fibrosis Non-Invasively in Challenging Cases

Author:

Ahmad Yousef1ORCID,Mooney Joshua2,Allen Isabel E.3ORCID,Seaman Julia4,Kalra Angad5,Muelly Michael5,Reicher Joshua5

Affiliation:

1. Department of Pulmonary and Critical Care, University of Cincinnati Medical Center, 231 Albert Sabin Way, ML 0564, Cincinnati, OH 45267-0564, USA

2. Stanford Health Care, Department of Pulmonary, Allergy, and Critical Care Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA

3. Department of Epidemiology & Biostatistics, University of California San Francisco, 550 16th Street, 2nd Floor, San Francisco, CA 94158-2549, USA

4. Bay View Analytics, 6924 Thornhill Dr, Oakland, CA 94611, USA

5. IMVARIA, 2930 Domingo Ave #1496, Berkeley, CA 94705, USA

Abstract

Radiologic usual interstitial pneumonia (UIP) patterns and concordant clinical characteristics define a diagnosis of idiopathic pulmonary fibrosis (IPF). However, limited expert access and high inter-clinician variability challenge early and pre-invasive diagnostic sensitivity and differentiation of IPF from other interstitial lung diseases (ILDs). We investigated a machine learning-driven software system, Fibresolve, to indicate IPF diagnosis in a heterogeneous group of 300 patients with interstitial lung disease work-up in a retrospective analysis of previously and prospectively collected registry data from two US clinical sites. Fibresolve analyzed cases at the initial pre-invasive assessment. An Expert Clinical Panel (ECP) and three panels of clinicians with varying experience analyzed the cases for comparison. Ground Truth was defined by separate multi-disciplinary discussion (MDD) with the benefit of surgical pathology results and follow-up. Fibresolve met both pre-specified co-primary endpoints of sensitivity superior to ECP and significantly greater specificity (p = 0.0007) than the non-inferior boundary of 80.0%. In the key subgroup of cases with thin-slice CT and atypical UIP patterns (n = 124), Fibresolve’s diagnostic yield was 53.1% [CI: 41.3–64.9] (versus 0% pre-invasive clinician diagnostic yield in this group), and its specificity was 85.9% [CI: 76.7–92.6%]. Overall, Fibresolve was found to increase the sensitivity and diagnostic yield for IPF among cases of patients undergoing ILD work-up. These results demonstrate that in combination with standard clinical assessment, Fibresolve may serve as an adjunct in the diagnosis of IPF in a pre-invasive setting.

Funder

IMVARIA Inc.

Publisher

MDPI AG

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