Quantifying Next Generation Sequencing Sample Pre-Processing Bias in HIV-1 Complete Genome Sequencing-Reference-Cited by-同舟云学术

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Quantifying Next Generation Sequencing Sample Pre-Processing Bias in HIV-1 Complete Genome Sequencing

Published:2016-01-07 Issue:1 Volume:8 Page:12
ISSN:1999-4915
Container-title:Viruses
language:en
Short-container-title:Viruses

Author:

Vrancken Bram,Trovão Nídia,Baele Guy,van Wijngaerden Eric,Vandamme Anne-Mieke,van Laethem Kristel,Lemey Philippe

Funder

Fonds Wetenschappelijk Onderzoek

Onderzoeksraad, KU Leuven

Seventh Framework Programme

European Commission

European research council

Publisher

MDPI AG

Subject

Virology,Infectious Diseases

Link

http://www.mdpi.com/1999-4915/8/1/12/pdf

Reference79 articles.

1. Multiple, Linked Human Immunodeficiency Virus Type 1 Drug Resistance Mutations in Treatment-Experienced Patients Are Missed by Standard Genotype Analysis

2. Worldwide evaluation of DNA sequencing approaches for identification of drug resistance mutations in the human immunodeficiency virus type 1 reverse transcriptase;Schuurman;J. Clin. Microbiol.,1999

3. Blinded, Multicenter Comparison of Methods To Detect a Drug-Resistant Mutant of Human Immunodeficiency Virus Type 1 at Low Frequency

4. Underestimation of HIV Type 1 Drug Resistance Mutations: Results from the ENVA-2 Genotyping Proficiency Program

5. No response to first-line tenofovir+lamivudine+efavirenz despite optimization according to baseline resistance testing: Impact of resistant minority variants on efficacy of low genetic barrier drugs

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1. Incorporating temporal dynamics of mutations to enhance the prediction capability of antiretroviral therapy’s outcome for HIV-1;Bioinformatics;2024-05-22

2. NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A Rapid, PCR-Free Method for SARS-CoV-2 Whole-Genome Sequencing in Clinical Samples;Pathogens;2024-01-09

3. NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A rapid, PCR-free method for whole genome sequencing of pathogens in clinical samples;2023-03-12

4. Protease and gag diversity and drug resistance mutations among treatment-naive Mexican people living with HIV;BMC Infectious Diseases;2022-05-10

5. Application of high-throughput sequencing technology in HIV drug resistance detection;Biosafety and Health;2021-10

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