Detection of Coffee Leaf Miner Using RGB Aerial Imagery and Machine Learning

Author:

Vilela Emerson Ferreira1,Silva Cileimar Aparecida da1,Botti Jéssica Mayara Coffler1ORCID,Martins Elem Fialho1,Santana Charles Cardoso2ORCID,Marin Diego Bedin1,Freitas Agnaldo Roberto de Jesus3ORCID,Jaramillo-Giraldo Carolina1,Lopes Iza Paula de Carvalho1,Corrêdo Lucas de Paula4ORCID,Queiroz Daniel Marçal de5ORCID,Rossi Giuseppe6ORCID,Bambi Gianluca6ORCID,Conti Leonardo6ORCID,Venzon Madelaine1ORCID

Affiliation:

1. Agriculture and Livestock Research Enterprise of Minas Gerais (EPAMIG-Sudeste), Viçosa 36570-000, MG, Brazil

2. Minas Gerais Agricultural Research Agency (EPAMIG)—Pitangui Institute of Agricultural Technology (ITAP), Pitangui 35650-000, MG, Brazil

3. Department of Soil, Federal University of Viçosa, Viçosa 36570-900, MG, Brazil

4. Department of Agronomy, Federal University of Viçosa, Viçosa 36570-900, MG, Brazil

5. Department of Agricultural Engineering, Federal University of Viçosa, Viçosa 36571-900, MG, Brazil

6. Department of Agriculture, Food, Environment and Forestry, University of Florence, 50121 Florence, Italy

Abstract

The sustainability of coffee production is a concern for producers around the world. To be sustainable, it is necessary to achieve satisfactory levels of coffee productivity and quality. Pests and diseases cause reduced productivity and can affect the quality of coffee beans. To ensure sustainability, producers need to monitor pests that can lead to substantial crop losses, such as the coffee leaf miner, Leucoptera coffeella (Lepidoptera: Lyonetiidae), which belongs to the Lepidoptera order and the Lyonetiidae family. This research aimed to use machine learning techniques and vegetation indices to remotely identify infestations of the coffee leaf miner in coffee-growing regions. Field assessments of coffee leaf miner infestation were conducted in September 2023. Aerial images were taken using remotely piloted aircraft to determine 13 vegetative indices with RGB (red, green, blue) images. The vegetation indices were calculated using ArcGis 10.8 software. A comprehensive database encompassing details of coffee leaf miner infestation, vegetation indices, and crop data. The dataset was divided into training and testing subsets. A set of four machine learning algorithms was utilized: Random Forest (RF), Logistic Regression (LR), Support Vector Machine (SVM), and Stochastic Gradient Descent (SGD). Following hyperparameter tuning, the test subset was employed for model validation. Remarkably, both the SVM and SGD models demonstrated superior performance in estimating coffee leaf miner infestations, with kappa indices of 0.6 and 0.67, respectively. The combined use of vegetation indices and crop data increased the accuracy of coffee leaf miner detection. The RF model performed poorly, while the SVM and SGD models performed better. This situation highlights the challenges of tracking coffee leaf miner infestations in fields with varying ages of coffee plants, different cultivars, and other environmental variables.

Publisher

MDPI AG

Reference37 articles.

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2. CONAB Companhia Nacional de Abastecimento (2024, July 01). Historical Series—Arabica Coffee—Brazil, Available online: https://www.conab.gov.br/info-agro/safras/serie-historica-das-safras#café-2.

3. Carvalho, G.R., Ferreira, A.D., Andrade, V.T., Botelho, C.E., and Carvalho, J.P.F. (2021). Principais pragas do cafeeiro no Cerrado Mineiro: Reconhecimento e manejo. Cafeicultura do Cerrado, EPAMIG.

4. Natural mortality factors of Leucoptera coffeella (Lepidoptera:Lyonetiidae) on Coffea arabica;Pereira;Biocontrol Sci.,2007

5. Efeitos de variáveis ambientais, irrigação e vespas predadoras sobre Leucoptera coffeella (Guérin-Méneville) (Lepidoptera: Lyonetiidae) no cafeeiro;Fernandes;Neotrop. Entomol.,2009

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