Advancing Barrett’s Esophagus Segmentation: A Deep-Learning Ensemble Approach with Data Augmentation and Model Collaboration

Author:

Lee Jiann-Der123ORCID,Tsai Chih Mao1ORCID

Affiliation:

1. Department of Electrical Engineering, Chang Gung University, Taoyuan 33302, Taiwan

2. Department of Neurosurgery, Chang Gung Memorial Hospital at Linkou, Taoyuan 33305, Taiwan

3. Department of Electrical Engineering, Ming Chi University of Technology, New Taipei City 24330, Taiwan

Abstract

This approach provides a thorough investigation of Barrett’s esophagus segmentation using deep-learning methods. This study explores various U-Net model variants with different backbone architectures, focusing on how the choice of backbone influences segmentation accuracy. By employing rigorous data augmentation techniques and ensemble strategies, the goal is to achieve precise and robust segmentation results. Key findings include the superiority of DenseNet backbones, the importance of tailored data augmentation, and the adaptability of training U-Net models from scratch. Ensemble methods are shown to enhance segmentation accuracy, and a grid search is used to fine-tune ensemble weights. A comprehensive comparison with the popular Deeplabv3+ architecture emphasizes the role of dataset characteristics. Insights into training saturation help optimize resource utilization, and efficient ensembles consistently achieve high mean intersection over union (IoU) scores, approaching 0.94. This research marks a significant advancement in Barrett’s esophagus segmentation.

Funder

National Science and Technology Council (NSTC), Taiwan, Republic of China

Publisher

MDPI AG

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