Deep Learning-Based Medical Images Segmentation of Musculoskeletal Anatomical Structures: A Survey of Bottlenecks and Strategies

Author:

Bonaldi Lorenza1,Pretto Andrea2,Pirri Carmelo3ORCID,Uccheddu Francesca24ORCID,Fontanella Chiara Giulia24ORCID,Stecco Carla34ORCID

Affiliation:

1. Department of Civil, Environmental and Architectural Engineering, University of Padova, Via F. Marzolo 9, 35131 Padova, Italy

2. Department of Industrial Engineering, University of Padova, Via Venezia 1, 35121 Padova, Italy

3. Department of Neuroscience, University of Padova, Via A. Gabelli 65, 35121 Padova, Italy

4. Centre for Mechanics of Biological Materials (CMBM), University of Padova, Via F. Marzolo 9, 35131 Padova, Italy

Abstract

By leveraging the recent development of artificial intelligence algorithms, several medical sectors have benefited from using automatic segmentation tools from bioimaging to segment anatomical structures. Segmentation of the musculoskeletal system is key for studying alterations in anatomical tissue and supporting medical interventions. The clinical use of such tools requires an understanding of the proper method for interpreting data and evaluating their performance. The current systematic review aims to present the common bottlenecks for musculoskeletal structures analysis (e.g., small sample size, data inhomogeneity) and the related strategies utilized by different authors. A search was performed using the PUBMED database with the following keywords: deep learning, musculoskeletal system, segmentation. A total of 140 articles published up until February 2022 were obtained and analyzed according to the PRISMA framework in terms of anatomical structures, bioimaging techniques, pre/post-processing operations, training/validation/testing subset creation, network architecture, loss functions, performance indicators and so on. Several common trends emerged from this survey; however, the different methods need to be compared and discussed based on each specific case study (anatomical region, medical imaging acquisition setting, study population, etc.). These findings can be used to guide clinicians (as end users) to better understand the potential benefits and limitations of these tools.

Funder

MIUR, FISR 2019

Publisher

MDPI AG

Subject

Bioengineering

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