Evaluating the Effectiveness of 2D and 3D CT Image Features for Predicting Tumor Response to Chemotherapy

Author:

Abdoli Neman1ORCID,Zhang Ke12ORCID,Gilley Patrik1,Chen Xuxin1ORCID,Sadri Youkabed1,Thai Theresa3,Dockery Lauren4,Moore Kathleen4,Mannel Robert4,Qiu Yuchen1

Affiliation:

1. School of Electrical and Computer Engineering, University of Oklahoma, Norman, OK 73019, USA

2. Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA

3. Department of Radiology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA

4. Department of Obstetrics and Gynecology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA

Abstract

Background and Objective: 2D and 3D tumor features are widely used in a variety of medical image analysis tasks. However, for chemotherapy response prediction, the effectiveness between different kinds of 2D and 3D features are not comprehensively assessed, especially in ovarian-cancer-related applications. This investigation aims to accomplish such a comprehensive evaluation. Methods: For this purpose, CT images were collected retrospectively from 188 advanced-stage ovarian cancer patients. All the metastatic tumors that occurred in each patient were segmented and then processed by a set of six filters. Next, three categories of features, namely geometric, density, and texture features, were calculated from both the filtered results and the original segmented tumors, generating a total of 1403 and 1595 features for the 2D and 3D tumors, respectively. In addition to the conventional single-slice 2D and full-volume 3D tumor features, we also computed the incomplete-3D tumor features, which were achieved by sequentially adding one individual CT slice and calculating the corresponding features. Support vector machine (SVM)-based prediction models were developed and optimized for each feature set. Five-fold cross-validation was used to assess the performance of each individual model. Results: The results show that the 2D feature-based model achieved an AUC (area under the ROC curve (receiver operating characteristic)) of 0.84 ± 0.02. When adding more slices, the AUC first increased to reach the maximum and then gradually decreased to 0.86 ± 0.02. The maximum AUC was yielded when adding two adjacent slices, with a value of 0.91 ± 0.01. Conclusions: This initial result provides meaningful information for optimizing machine learning-based decision-making support tools in the future.

Funder

National Institute of General Medical Sciences

Center for Advancement of Science & Technology

Stephenson Cancer Center Team

University of Oklahoma Libraries’ Open Access

Publisher

MDPI AG

Subject

Bioengineering

Reference45 articles.

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