Accelerating High b-Value Diffusion-Weighted MRI Using a Convolutional Recurrent Neural Network (CRNN-DWI)

Author:

Zhong Zheng12ORCID,Ryu Kanghyun1,Mao Jonathan3,Sun Kaibao2,Dan Guangyu2ORCID,Vasanawala Shreyas1,Zhou Xiaohong24ORCID

Affiliation:

1. Departments of Radiology, Stanford University, Stanford, CA 94305, USA

2. Center for Magnetic Resonance Research, University of Illinois Chicago, Chicago, IL 60612, USA

3. Henry M. Gunn High School, Palo Alto, CA 94306, USA

4. Department of Radiology, Neurosurgery and Biomedical Engineering, University of Illinois Chicago, Chicago, IL 60607, USA

Abstract

Purpose: To develop a novel convolutional recurrent neural network (CRNN-DWI) and apply it to reconstruct a highly undersampled (up to six-fold) multi-b-value, multi-direction diffusion-weighted imaging (DWI) dataset. Methods: A deep neural network that combines a convolutional neural network (CNN) and recurrent neural network (RNN) was first developed by using a set of diffusion images as input. The network was then used to reconstruct a DWI dataset consisting of 14 b-values, each with three diffusion directions. For comparison, the dataset was also reconstructed with zero-padding and 3D-CNN. The experiments were performed with undersampling rates (R) of 4 and 6. Standard image quality metrics (SSIM and PSNR) were employed to provide quantitative assessments of the reconstructed image quality. Additionally, an advanced non-Gaussian diffusion model was employed to fit the reconstructed images from the different approaches, thereby generating a set of diffusion parameter maps. These diffusion parameter maps from the different approaches were then compared using SSIM as a metric. Results: Both the reconstructed diffusion images and diffusion parameter maps from CRNN-DWI were better than those from zero-padding or 3D-CNN. Specifically, the average SSIM and PSNR of CRNN-DWI were 0.750 ± 0.016 and 28.32 ± 0.69 (R = 4), and 0.675 ± 0.023 and 24.16 ± 0.77 (R = 6), respectively, both of which were substantially higher than those of zero-padding or 3D-CNN reconstructions. The diffusion parameter maps from CRNN-DWI also yielded higher SSIM values for R = 4 (>0.8) and for R = 6 (>0.7) than the other two approaches (for R = 4, <0.7, and for R = 6, <0.65). Conclusions: CRNN-DWI is a viable approach for reconstructing highly undersampled DWI data, providing opportunities to reduce the data acquisition burden.

Funder

National Institutes of Health

Publisher

MDPI AG

Subject

Bioengineering

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