Development of Molecular-Based Species Identification and Optimization of Reaction Conditions for Molecular Diagnosis of Three Major Asian Planthoppers (Hemiptera: Delphacidae)

Author:

Rahman Md-Mafizur12ORCID,Nam Hwayeun13,Choi Nakjung4ORCID,Kim Juil15ORCID

Affiliation:

1. Agriculture and Life Sciences Research Institute, Kangwon National University, Chuncheon 24341, Republic of Korea

2. Department of Biotechnology and Genetic Engineering, Faculty of Biological Science, Islamic University, Kushtia 7003, Bangladesh

3. Incheon International Airport Regional Office, Animal and Plant Quarantine Agency, Incheon 22382, Republic of Korea

4. National Institute of Crop Science, Rural Development Administration, Wanju 55365, Republic of Korea

5. Program of Applied Biology, Division of Bio-Resource Sciences, College of Agriculture and Life Science, Kangwon National University, Chuncheon 24341, Republic of Korea

Abstract

Asian planthoppers (Hemiptera: Delphacidae) that include brown planthoppers (BPH, Nilaparvata lugens, Stål), white-backed planthoppers (WBPH, Sogatella furcifera, Horváth), and small brown planthoppers (SBPH, Laodelphax striatellus, Fallén) are the primary sucking-type pests of rice. These three insects share morphological and sequence similarities. As insecticide resistance patterns and control strategies vary according to species, the accurate discrimination of these species is important. Here, we developed six species-specific primers based on partial mitochondrial genome sequences. The primers were successfully used in multiplex PCR, loop-mediated isothermal amplification (LAMP) assays, and conventional PCR. Here, we used genomic DNA obtained using the DNA-releasing technique (tissue samples were incubated at 95 °C for 5 min with 30 μL nuclease-free water, and the supernatant was used). We showed that multiplex PCR could analyze the density of each species following a mass collection in the field; the LAMP assay can diagnose the species within 40 min; conventional PCR can be widely applied to a large number of field samples, as well as individuals or mass collections. In conclusion, these results demonstrate the potential of the species-specific primers and DNA-releasing technique for accurate multiplex PCR and LAMP assays, which may assist the intensive field monitoring of integrated management of these species.

Funder

Rural Development Administration

National Research Foundation of Korea

Publisher

MDPI AG

Subject

Insect Science

Reference54 articles.

1. Heinrichs, E.A. (1994). Planthoppers, Springer.

2. Yashiro, T., and Sanada-Morimura, S. (2021). A Rapid Multiplex PCR Assay for Species Identification of Asian Rice Planthoppers (Hemiptera: Delphacidae) and Its Application to Early-Instar Nymphs in Paddy Fields. PLoS ONE, 16.

3. Evans, L.T., and Evans, L.T. (1998). Feeding the Ten Billion: Plants and Population Growth, Cambridge University Press.

4. Rice Planthopper Problems and Relevant Causes in China;Cheng;Planthoppers New Threat. Sustain. Intensive Rice Prod. Syst. Asia,2009

5. Recent Status of Insecticide Resistance in Asian Rice Planthoppers;Matsumura;Japan Agric. Res. Q. JARQ,2010

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