Are Artificial Intelligence-Assisted Three-Dimensional Histological Reconstructions Reliable for the Assessment of Trabecular Microarchitecture?

Author:

Báskay János12ORCID,Pénzes Dorottya3,Kontsek Endre4ORCID,Pesti Adrián4ORCID,Kiss András4,Guimarães Carvalho Bruna Katherine3,Szócska Miklós1ORCID,Szabó Bence Tamás5,Dobó-Nagy Csaba5ORCID,Csete Dániel6,Mócsai Attila6ORCID,Németh Orsolya3,Pollner Péter12,Mijiritsky Eitan78ORCID,Kivovics Márton3ORCID

Affiliation:

1. Data-Driven Health Division of National Laboratory for Health Security, Health Services Management Training Centre, Semmelweis University, Kútvölgyi út 2, 1125 Budapest, Hungary

2. Department of Biological Physics, Eötvös Loránd University, Pázmány Péter Sétány 1/a, 1117 Budapest, Hungary

3. Department of Community Dentistry, Semmelweis University, Szentkirályi Utca 40, 1088 Budapest, Hungary

4. Department of Pathology, Forensic and Insurance Medicine, Semmelweis University, Üllői út 93, 1091 Budapest, Hungary

5. Department of Oral Diagnostics, Semmelweis University, Szentkirályi Utca 47, 1088 Budapest, Hungary

6. Department of Physiology, Semmelweis University, Tűzoltó u. 34-37, 1094 Budapest, Hungary

7. Department of Head and Neck Surgery and Maxillofacial Surgery, Tel-Aviv Sourasky Medical Center, School of Medicine, Tel Aviv University, Tel Aviv 64239, Israel

8. Goldschleger School of Dental Medicine, Faculty of Medicine, Tel Aviv University, Tel Aviv 39040, Israel

Abstract

Objectives: This study aimed to create a three-dimensional histological reconstruction through the AI-assisted classification of tissues and the alignment of serial sections. The secondary aim was to evaluate if the novel technique for histological reconstruction accurately replicated the trabecular microarchitecture of bone. This was performed by conducting micromorphometric measurements on the reconstruction and comparing the results obtained with those of microCT reconstructions. Methods: A bone biopsy sample was harvested upon re-entry following sinus floor augmentation. Following microCT scanning and histological processing, a modified version of the U-Net architecture was trained to categorize tissues on the sections. Detector-free local feature matching with transformers was used to create the histological reconstruction. The micromorphometric parameters were calculated using Bruker’s CTAn software (version 1.18.8.0, Bruker, Kontich, Belgium) for both histological and microCT datasets. Results: Correlation coefficients calculated between the micromorphometric parameters measured on the microCT and histological reconstruction suggest a strong linear relationship between the two with p-values of 0.777, 0.717, 0.705, 0.666, and 0.687 for BV/TV, BS/TV, Tb.Pf Tb.Th, and Tb.Sp, respectively. Bland–Altman and mountain plots suggest good agreement between BV/TV measurements on the two reconstruction methods. Conclusions: This novel method for three-dimensional histological reconstruction provides researchers with a tool that enables the assessment of accurate trabecular microarchitecture and histological information simultaneously.

Funder

Ministry for Innovation and Technology in Hungary

OTKA

Data-driven Health Division of Health Safety NL

Hungarian Ministry of National Economy

Publisher

MDPI AG

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