Stenomitos nagquensis sp. nov. (Leptolyngbyaceae, Cyanobacteria) from a Meadow Wetland in the Tibet Plateau: A Novel Species Studied Based on a Polyphasic Approach

Author:

Pecundo Melissa H.123ORCID,Chen Tao3,Wang Yunhua3,Wen Xuemei4,Hu Zhangli125ORCID,Chen Huirong1ORCID,Li Nan3

Affiliation:

1. Shenzhen Engineering Laboratory of Marine Algal Biotechnology, Guangdong Provincial Key Laboratory of Plant Epigenetics, Longhua Innovation Institute for Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China

2. College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China

3. Fairy Lake Botanical Garden, Chinese Academy of Sciences, Shenzhen 518004, China

4. Tibet Plateau Institute of Biology, Lhasa 850001, China

5. Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China

Abstract

A novel cyanobacterial strain (CSML-F035) here described as Stenomitos nagquensis sp. nov. was isolated from a plateau meadow wetland habitat in the Tibet Autonomous Region. The novel strain was studied based on a polyphasic approach by combining characteristics of cell morphology and evidence from molecular data and ecology. Phylogenetic analyses based on the 16S rRNA and rbcL genes indicated that the novel strain is a member of the genus Stenomitos (Leptolyngbyaceae) but is positioned in a unique clade, with strongly supported values from BI, ML, and NJ methods. The percentage similarity of the 16S rRNA gene sequence of CSML-F035 compared with known strains of Stenomitos was >97%. Morphologically, S. nagquensis sp. nov. possesses overlapping morphological characteristics with other Stenomitos species, with thin trichomes enclosed in a firm, colorless, hyaline, persistent mucilage. However, the strain appeared to have slightly smaller cells compared to most known species of Stenomitos. Further analyses of the 16S–23S ITS region showed dissimilarity at 11.2–22.8% compared to known species of Stenomitos. The secondary helices—including D1–D1, V2, Box–B, and V3—that were predicted based on the 16S–23S ITS region for Stenomitos nagquensis sp. nov. were also distinct, thereby providing strong additional support for the separation of this species. This study highlights the importance of unexplored habitats in the Tibet region in which cyanobacterial diversity can be deemed high, with many potential new species that remain poorly explored.

Funder

Shenzhen Fairy Lake Botanical Garden for Metagenomics Studies on Microbial Diversity in the Coralloid Roots in Cycadales

China National Forestry and Grassland Administration Special Financial Aid Programs for Wildlife Conservation and Nature Reserve Management

Rescue and Breeding of Rare and Endangered Wild Species

National Natural Science Foundation of China

Shenzhen Special Fund for Sustainable Development

Guangxi Innovation Drive Development Special Fund

Publisher

MDPI AG

Subject

Nature and Landscape Conservation,Agricultural and Biological Sciences (miscellaneous),Ecological Modeling,Ecology

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