A Cost-Effective Immobilization Method for MBP Fusion Proteins on Microtiter Plates Using a Gelatinized Starch–Agarose Mixture and Its Application for Convenient Protein–Protein Interaction Analysis

Author:

Emoto Yuri1,Katayama Ryoya23,Hibino Emi14,Ishihara Sho1,Goda Natsuko1,Tenno Takeshi15,Kobashigawa Yoshihiro6,Morioka Hiroshi6,Hiroaki Hidekazu13457ORCID

Affiliation:

1. Laboratory of Structural Molecular Pharmacology, Graduate School of Pharmaceutical Sciences, Nagoya University, Furocho, Chikusa-ku, Nagoya 464-8601, Aichi, Japan

2. Division of Biological Sciences, Graduate School of Science, Nagoya University, Furocho, Chikusa-ku, Nagoya 464-8601, Aichi, Japan

3. Graduate Program of Transformative Chem-Bio Research, Nagoya University, Furocho, Chikusa-ku, Nagoya 464-8601, Aichi, Japan

4. WISE Program, Convolution of Informatics and Biomedical Sciences on Glocal Alliances, Nagoya University, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Aichi, Japan

5. BeCellBar LLC., 1 Kamimura, Showa-ku, Nagoya 466-0802, Aichi, Japan

6. Department of Analytical and Biophysical Chemistry, Graduate School of Pharmaceutical Sciences, Kumamoto University; 5-1 Oe-honmachi, Chuo-ku, Kumamoto 862-0973, Kumamoto, Japan

7. Center for One Medicine Innovative Translational Research (COMIT), Nagoya University, Nagoya 464-8601, Aichi, Japan

Abstract

The detection and quantification of protein–protein interactions (PPIs) is a crucial technique that often involves the use of recombinant proteins with fusion protein tags, such as maltose-binding protein (MBP) and glutathione-S-transferase (GST). In this study, we improved the cohesive and sticky properties of gelatinized starch by supplementing it with agarose, resulting in a harder gel that could coat the bottom of a microtiter plate. The resulting gelatinized starch/agarose mixture allowed for the efficient immobilization of MBP-tagged proteins on the coated plates, enabling the use of indirect ELISA-like PPI assays. By using the enzymatic activity of GST as an indicator, we succeeded in determining the dissociation constants between MBP-tagged and GST-tagged proteins on 96-well microtiter plates and a microplate reader without any expensive specialized equipment.

Funder

Japan Society for the Promotion of Science (JSPS) KAKENHI

Japan Agency for Medical Research and Development

Japan Agency for Medical Research and Development–Core Research for Evolutional Science and Technology

Publisher

MDPI AG

Subject

Biochemistry, Genetics and Molecular Biology (miscellaneous),Structural Biology,Biotechnology

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