Uncertainty Estimation for Quantitative Agarose Gel Electrophoresis of Nucleic Acids

Author:

Semenov Konstantin1,Taraskin Aleksandr12,Yurchenko Alexandra1,Baranovskaya Irina3ORCID,Purvinsh Lada4ORCID,Gyulikhandanova Natalia12,Vasin Andrey12ORCID

Affiliation:

1. Peter the Great St. Petersburg Polytechnic University, 29, Polytechnicheskaya Str., 195251 St. Petersburg, Russia

2. Smorodintsev Research Institute of Influenza, 15/17, Prof. Popov Str., 197376 St. Petersburg, Russia

3. Augusta University, 1120 15th Str., Augusta, GA 30912, USA

4. The University of Chicago, 947 E. 58th Str., Chicago, IL 60637, USA

Abstract

This paper considers the evaluation of uncertainty of quantitative gel electrophoresis. To date, such uncertainty estimation presented in the literature are based on the multiple measurements performed for assessing the intra- and interlaboratory reproducibility using standard samples. This paper shows how to estimate the uncertainty in cases where we cannot study scattering components of the results. The first point is dedicated to a case where we have standard samples (the direct expressions are shown). The second point considers the situation when standard samples are absent (the algorithm for estimating the lower bound for uncertainty is discussed). The role of the data processing algorithm is demonstrated.

Funder

Ministry of Science and Higher Education of the Russian Federation

Publisher

MDPI AG

Subject

Electrical and Electronic Engineering,Biochemistry,Instrumentation,Atomic and Molecular Physics, and Optics,Analytical Chemistry

Reference49 articles.

1. Agarose Gel Electrophoresis;Green;Cold Spring Harb. Protoc.,2019

2. Agarose gel electrophoresis;Koontz;Methods Enzymol.,2013

3. The use of Quantitative Agarose Gel Electrophoresis for rapid analysis of the integrity of protein-DNA complexes;Adkins;J. Biochem. Biophys. Methods,2007

4. Rapid agarose gel electrophoretic mobility shift assay for quantitating protein: RNA interactions;Ream;Anal. Biochem.,2016

5. Agarose Gel Electrophoresis for the Separation of DNA Fragments;Lee;J. Vis. Exp.,2012

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