A Statistical Methodology for Evaluating Asymmetry after Normalization with Application to Genomic Data

Author:

Leiva Víctor1ORCID,Corzo Jimmy2ORCID,Vergara Myrian E.3ORCID,Ospina Raydonal45ORCID,Castro Cecilia6ORCID

Affiliation:

1. Escuela de Ingeniería Industrial, Pontificia Universidad Católica de Valparaíso, Valparaíso 2362807, Chile

2. Departamento de Estadística, Facultad de Ciencias, Universidad Nacional de Colombia, Bogotá 111321, Colombia

3. Escuela de Ciencias Básicas y Aplicadas, Universidad de La Salle, Bogotá 110231, Colombia

4. Departamento de Estatística, LInCa, Universidade Federal da Bahia, Salvador 40170-110, Brazil

5. Departamento de Estatística, CASTLab, Universidade Federal da Pernambuco, Recife 50670-901, Brazil

6. Centre of Mathematics, Universidade do Minho, 4710-057 Braga, Portugal

Abstract

This study evaluates the symmetry of data distributions after normalization, focusing on various statistical tests, including a few explored test named Rp. We apply normalization techniques, such as variance stabilizing transformations, to ribonucleic acid sequencing data with varying sample sizes to assess their effectiveness in achieving symmetric data distributions. Our findings reveal that while normalization generally induces symmetry, some samples retain asymmetric distributions, challenging the conventional assumption of post-normalization symmetry. The Rp test, in particular, shows superior performance when there are variations in sample size and data distribution, making it a preferred tool for assessing symmetry when applied to genomic data. This finding underscores the importance of validating symmetry assumptions during data normalization, especially in genomic data, as overlooked asymmetries can lead to potential inaccuracies in downstream analyses. We analyze postmortem lateral temporal lobe samples to explore normal aging and Alzheimer’s disease, highlighting the critical role of symmetry testing in the accurate interpretation of genomic data.

Funder

Vice-rectorate for Research, Creation

National Agency for Research and Development (ANID) of the Chilean government under the Ministry of Science, Technology, Knowledge, and Innovation

Conselho Nacional de Desenvolvimento Científico e Tecnológico

Fundação de Amparo a Ciência e Tecnologia do Estado da Bahia

HERMES

Portuguese funds through the CMAT—Research Centre of Mathematics of University of Minho, Portugal

Publisher

MDPI AG

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