Molecular Evidence Reveals Taxonomic Uncertainties and Cryptic Diversity in the Neotropical Catfish of the Genus Pimelodus (Siluriformes: Pimelodidae)

Author:

Limeira Filho Daniel1ORCID,França Elidy Rayane de Rezende1,Costa Dalton Kaynnan de Prado2ORCID,Lima Renato Correia3ORCID,Nascimento Maria Histelle Sousa do4ORCID,Batista Jacqueline da Silva35ORCID,Barros Maria Claudene1246,Fraga Elmary da Costa127

Affiliation:

1. Graduate Program in Animal Science—PPGCA, Center of Agrarian Sciences—CCA, Maranhão State University—UEMA, São Luís 65055-310, MA, Brazil

2. Graduate Program in Biodiversity, Environment, and Health—PPGBAS, Caxias Center of Higher Education—CESC, Maranhão State University—UEMA, Praça Duque de Caxias, s/n-Morro do Alecrim, Centro, Caxias 65604-380, MA, Brazil

3. Graduate Program in Genetics, Conservation, and Evolutionary Biology (PPG-GCBEv), National Amazonian Research Institute–INPA, Av. André Araújo, 2936, Aleixo, Manaus 69060-001, AM, Brazil

4. Graduate Program in Biodiversity and Biotechnology—BIONORTE Network, Maranhão State University—UEMA, Cidade Universitária Paulo VI—Avenida Lourenço Vieira da Silva, n° 1.000, Jardim São Cristóvão, São Luís 665055-310, MA, Brazil

5. Molecular Biology Thematic Laboratory—LTBM, Coordination of Biodiversity—COBIO, National Amazonian Research Institute–INPA, Av. André Araújo, 2936, Petrópolis, Manaus 69067-375, AM, Brazil

6. Laboratory of Molecular Biology—LABMOL, Department of Chemistry and Biology, Caxias Center of Higher Education—CESC, Maranhão State University—UEMA, Praça Duque de Caxias, s/n-Morro do Alecrim, Centro, Caxias 65604-380, MA, Brazil

7. Laboratory of Genetics—LABGEN, Department of Chemistry and Biology, Caxias Center of Higher Education—CESC, Maranhão State University—UEMA, Praça Duque de Caxias, s/n-Morro do Alecrim, Centro, Caxias 65604-380, MA, Brazil

Abstract

Pimelodus is the most speciose genus of the family Pimelodidae, and is amply distributed in the Neotropical region. The species-level taxonomy and phylogenetic relationships within this genus are still poorly resolved, however. These taxonomic problems and the general lack of data have generated major uncertainties with regard to the identification of specimens from different localities. In the present study, we applied a single-locus species delimitation approach to identify the MOTUs found within the genus Pimelodus and provide sound evidence for the evaluation of the species richness of this genus in the different river basins of the Neotropical region. The study was based on the analysis of sequences of the mitochondrial COI gene of 13 nominal species, which resulted in the identification of 24 consensus MOTUs. Only six nominal species were recovered as well-defined molecular entities by both the traditional barcoding analysis and the molecular delimitation methods, while the other seven presented cryptic diversity or persistent taxonomic uncertainties. The lineages identified from the Parnaíba ecoregions, Amazonas Estuary and Coastal Drainages may represent a much greater diversity of Pimelodus species than that recognized currently, although a more detailed study of this diversity will be necessary to provide a more definitive classification of the genus.

Funder

Maranhão State Foundation for Research and Scientific and Technological Development—FAPEMA

Amazonas State Research Support Foundation (FAPEAM), Institutional Program for Support to Postgraduate Studies Stricto Sensu

Universal Amazonas

Publisher

MDPI AG

Reference95 articles.

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3. Van Der Sleen, P., and Albert, J.S. (2018). Field Guide to the Fishes of the Amazon, Orinoco, and Guianas, Princeton University Press.

4. Reis, R.E., Kullander, S.O., and Ferraris, C.J. (2003). Check List of the Freshwater Fishes of South and Central America, Edipucrs.

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