Genetic Analysis as a Tool to Improve the Monitoring of Stranded Cetaceans in Chile

Author:

Kraft Sebastián12ORCID,Rodríguez Francisca23,Olavarría Carlos45ORCID,Poulin Elie23ORCID,Pérez-Álvarez María José2356ORCID

Affiliation:

1. Centro de Ciências do Mar (CCMAR), Universidade do Algarve, 8005-139 Faro, Portugal

2. Laboratorio de Ecología Molecular, Departamento de Ciencias Ecológicas, Instituto de Ecología y Biodiversidad, Facultad de Ciencias, Universidad de Chile, Santiago 7800003, Chile

3. Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago 7800003, Chile

4. Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena 1720256, Chile

5. Eutropia, Centro de Investigación, Santiago 8320238, Chile

6. Escuela de Medicina Veterinaria, Facultad de Medicina y Ciencias de la Salud, Universidad Mayor, Santiago 8580745, Chile

Abstract

Cetacean strandings are a valuable source of information for several studies from species richness to conservation and management. During the examination of strandings, taxonomic and sex identification might be hindered for several reasons. Molecular techniques are valuable tools to obtain that missing information. This study evaluates how gene fragment amplification protocols can support the records of strandings done in the field in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. Through a collaboration between a scientific laboratory and government institution in Chile, 63 samples were analyzed. Thirty-nine samples were successfully identified to the species level. In total, 17 species of six families were detected, including six species of conservation interest. Of the 39 samples, 29 corresponded to corroborations of field identifications. Seven corresponded to unidentified samples and three to corrected misidentifications, adding up to 28% of the identified samples. Sex was successfully identified for 58 of the 63 individuals. Twenty were corroborations, 34 were previously unidentified, and four were corrections. Applying this method improves the stranding database of Chile and provides new data for future management and conservation tasks.

Funder

CONICYT Program FONDECYT Iniciación

ANID Millennium Science Initiative Program

Centro de Investigación EUTROPIA

Portuguese national funding agency for science, research, and technology (FCT) projects

Publisher

MDPI AG

Subject

General Agricultural and Biological Sciences,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology

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