Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant

Author:

Naik Bindu1,Kumar Vijay2ORCID,Rizwanuddin Sheikh3ORCID,Chauhan Mansi3,Choudhary Megha2,Gupta Arun Kumar1ORCID,Kumar Pankaj4ORCID,Kumar Vivek2ORCID,Saris Per Erik Joakim5ORCID,Rather Muzamil Ahmad6ORCID,Bhuyan Shuvam6,Neog Panchi Rani6,Mishra Sadhna7ORCID,Rustagi Sarvesh8

Affiliation:

1. Department of Food Science and Technology, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India

2. Himalayan School of Biosciences, Swami Rama Himalayan University, Swami Rama Nagar, Jolly Grant, Dehradun 248014, Uttarakhand, India

3. Department of Life Sciences, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India

4. Department of Microbiology, Dolphin (PG) Institute of Biomedical and Natural Sciences, Dehradun 248007, Uttarakhand, India

5. Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinki, FI-00014 Helsinki, Finland

6. Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur 784028, Assam, India

7. Faculty of Agricultural Sciences, GLA University, Mathura 281406, Uttar Pradesh, India

8. Department of Food Technology, Uttaranchal University, Dehradun 248007, Uttarakhand, India

Abstract

To explore changes in proteins and metabolites under stress circumstances, genomics, proteomics, and metabolomics methods are used. In-depth research over the previous ten years has gradually revealed the fundamental processes of plants’ responses to environmental stress. Abiotic stresses, which include temperature extremes, water scarcity, and metal toxicity brought on by human activity and urbanization, are a major cause for concern, since they can result in unsustainable warming trends and drastically lower crop yields. Furthermore, there is an emerging reliance on agrochemicals. Stress is responsible for physiological transformations such as the formation of reactive oxygen, stomatal opening and closure, cytosolic calcium ion concentrations, metabolite profiles and their dynamic changes, expression of stress-responsive genes, activation of potassium channels, etc. Research regarding abiotic stresses is lacking because defense feedbacks to abiotic factors necessitate regulating the changes that activate multiple genes and pathways that are not properly explored. It is clear from the involvement of these genes that plant stress response and adaptation are complicated processes. Targeting the multigenicity of plant abiotic stress responses caused by genomic sequences, transcripts, protein organization and interactions, stress-specific and cellular transcriptome collections, and mutant screens can be the first step in an integrative approach. Therefore, in this review, we focused on the genomes, proteomics, and metabolomics of tomatoes under abiotic stress.

Publisher

MDPI AG

Subject

Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Spectroscopy,Molecular Biology,General Medicine,Catalysis

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