Accelerating In-Transit Co-Processing for Scientific Simulations Using Region-Based Data-Driven Analysis

Author:

Walldén MarcusORCID,Okita Masao,Ino Fumihiko,Drikakis Dimitris,Kokkinakis Ioannis

Abstract

Increasing processing capabilities and input/output constraints of supercomputers have increased the use of co-processing approaches, i.e., visualizing and analyzing data sets of simulations on the fly. We present a method that evaluates the importance of different regions of simulation data and a data-driven approach that uses the proposed method to accelerate in-transit co-processing of large-scale simulations. We use the importance metrics to simultaneously employ multiple compression methods on different data regions to accelerate the in-transit co-processing. Our approach strives to adaptively compress data on the fly and uses load balancing to counteract memory imbalances. We demonstrate the method’s efficiency through a fluid mechanics application, a Richtmyer–Meshkov instability simulation, showing how to accelerate the in-transit co-processing of simulations. The results show that the proposed method expeditiously can identify regions of interest, even when using multiple metrics. Our approach achieved a speedup of 1.29× in a lossless scenario. The data decompression time was sped up by 2× compared to using a single compression method uniformly.

Funder

Japan Society for the Promotion of Science

Publisher

MDPI AG

Subject

Computational Mathematics,Computational Theory and Mathematics,Numerical Analysis,Theoretical Computer Science

Reference49 articles.

1. The Tensions of In Situ Visualization

2. In Situ Visualization at Extreme Scale: Challenges and Opportunities;Ma;IEEE Comput. Graph. Appl.,2009

3. In-situ Visualization: State-of-the-Art and Some Use Caseshttps://www.hpc.cineca.it/sites/default/files/In-situ_Visualization_State-of-the-art_and_Some_Use_Cases.pdf

4. In Situ Visualization for Large-Scale Combustion Simulations;Yu;IEEE Comput. Graph. Appl.,2010

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