Revolutionizing Cancer Research: The Impact of Artificial Intelligence in Digital Biobanking

Author:

Frascarelli Chiara12,Bonizzi Giuseppina3,Musico Camilla Rosella3,Mane Eltjona1,Cassi Cristina3,Guerini Rocco Elena12,Farina Annarosa4,Scarpa Aldo5ORCID,Lawlor Rita6,Reggiani Bonetti Luca7,Caramaschi Stefania7,Eccher Albino7ORCID,Marletta Stefano58ORCID,Fusco Nicola12ORCID

Affiliation:

1. Division of Pathology, IEO, European Institute of Oncology IRCCS, 20139 Milan, Italy

2. Department of Oncology and Hemato-Oncology, University of Milan, 20122 Milan, Italy

3. Biobank for Translational and Digital Medicine, IEO, European Institute of Oncology IRCCS, 20139 Milan, Italy

4. Central Information Systems and Technology Directorate, IEO, European Institute of Oncology IRCCS, 20139 Milan, Italy

5. Department of Diagnostics and Public Health, Section of Pathology, University of Verona, 37134 Verona, Italy

6. ARC-Net Research Centre and Department of Diagnostics and Public Health, University of Verona, 37134 Verona, Italy

7. Section of Pathology, Department of Medical and Surgical Sciences for Children and Adults, University of Modena and Reggio Emilia, University Hospital of Modena, 41121 Modena, Italy

8. Division of Pathology, Humanitas Cancer Center, 95045 Catania, Italy

Abstract

Background. Biobanks are vital research infrastructures aiming to collect, process, store, and distribute biological specimens along with associated data in an organized and governed manner. Exploiting diverse datasets produced by the biobanks and the downstream research from various sources and integrating bioinformatics and “omics” data has proven instrumental in advancing research such as cancer research. Biobanks offer different types of biological samples matched with rich datasets comprising clinicopathologic information. As digital pathology and artificial intelligence (AI) have entered the precision medicine arena, biobanks are progressively transitioning from mere biorepositories to integrated computational databanks. Consequently, the application of AI and machine learning on these biobank datasets holds huge potential to profoundly impact cancer research. Methods. In this paper, we explore how AI and machine learning can respond to the digital evolution of biobanks with flexibility, solutions, and effective services. We look at the different data that ranges from specimen-related data, including digital images, patient health records and downstream genetic/genomic data and resulting “Big Data” and the analytic approaches used for analysis. Results. These cutting-edge technologies can address the challenges faced by translational and clinical research, enhancing their capabilities in data management, analysis, and interpretation. By leveraging AI, biobanks can unlock valuable insights from their vast repositories, enabling the identification of novel biomarkers, prediction of treatment responses, and ultimately facilitating the development of personalized cancer therapies. Conclusions. The integration of biobanking with AI has the potential not only to expand the current understanding of cancer biology but also to pave the way for more precise, patient-centric healthcare strategies.

Publisher

MDPI AG

Subject

Medicine (miscellaneous)

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